| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3043 |
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| Symbol | |
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| ID | 4174815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3673771 |
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| End bp | 3674211 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056069 |
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| Product | flagellar export protein FliJ |
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| Protein accession | YP_662603 |
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| Protein GI | 109899348 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2882] Flagellar biosynthesis chaperone |
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| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGGTAA GTAAGCAATT GCAAATGGTC GCTGATTGGG AGCGACGAAA AGAACAAAAG
ATGGCAACCG ATTATCAGTT GGCGCAGCAA AATGTGGTTG ATAATCAAAA CAAACTTAGT
GGACTTGAGC AATATCGGGT AAATTATTTG AAAGAAGGGA TCCGAAAAGG TCAGCTAGGG
TTAGCCGCCA AAAATTACGG GCAGCACCAG TCATTTGTCG GCAAAATTGA CGCGGCCTGT
GAACAACAAA CAAAACAAGT CAGTAATGCG CTGGTGGTGG CTGAGCAGCG TAAAGCACAG
TGGCTTGCCC AGCAAAGAAA GCGAAAAGCA GTCGAGATGC TACTTGATAA ACAGGCCCTT
AAAATACAAC AAAAACAGGA TCGAGCAGAG CAACAGATGC TTGACGAGCT CGCGTTACAA
AAATTCATCC GTAGCAAATA A
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| Protein sequence | MPVSKQLQMV ADWERRKEQK MATDYQLAQQ NVVDNQNKLS GLEQYRVNYL KEGIRKGQLG
LAAKNYGQHQ SFVGKIDAAC EQQTKQVSNA LVVAEQRKAQ WLAQQRKRKA VEMLLDKQAL
KIQQKQDRAE QQMLDELALQ KFIRSK
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