| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3004 |
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| Symbol | |
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| ID | 4174774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3631039 |
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| End bp | 3631722 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638056029 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_662566 |
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| Protein GI | 109899311 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATAT TCTCGCGTTT CACAGACATA GTGAACTCAA ATATCAACGC CATTTTAGAT
AAGGCGGAAG ATCCTGAAAA AATGGTGCGC TTAATTATAC AAGAAATGGA AGACACATTG
GTTGAAGTAC GTTCAGCCTC GGCGAAAACA ATCGCTAATA AAAAGGAAAT TACAGCGCAA
ATTAGTAAAT TGCAAAACGA GGGTCGTGAC TGGCAGAGCA AAGCTGAGCT AGCGATCAAT
AAAGACCGAG AAGATCTTGC TCGTGCGGCC CTACAAGAAA AGAAAAAGTG TGATGAATAT
GCGGTAACGC TTGACGCTGA GCTATCAGCG GTAGATGAGC AAATTAGTAA ATTACAAAGT
GAAGTGACGC AATTACAGGA TAAACTGGCA GATGCTAAAG CTCGTCAGAA AACCATTATC
ATGCGTCAAA AAACGGTAAG TTCTCGTTTG GATATTAAGC GTACCTTGAA CGATGGCAAA
GTCGATGCCG CTATGGGACG CTTTGAGCAA TATGAGCGTA AAATAGATGA TCTAGAATCT
CAAGTGGATG CATATGATCT TGGTAAAAAG ACCTTAGCGG ATGAGTTTGC TGATTTAGCC
GCCGATGATG ACATAGATGA TGCGTTAGCG GCATTGAAGA AGAAAGTGAA GAAGCAATCA
GCTGATTCGA AAAATCAAGA CTAA
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| Protein sequence | MGIFSRFTDI VNSNINAILD KAEDPEKMVR LIIQEMEDTL VEVRSASAKT IANKKEITAQ
ISKLQNEGRD WQSKAELAIN KDREDLARAA LQEKKKCDEY AVTLDAELSA VDEQISKLQS
EVTQLQDKLA DAKARQKTII MRQKTVSSRL DIKRTLNDGK VDAAMGRFEQ YERKIDDLES
QVDAYDLGKK TLADEFADLA ADDDIDDALA ALKKKVKKQS ADSKNQD
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