| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2985 |
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| Symbol | |
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| ID | 4174755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3608909 |
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| End bp | 3610168 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056010 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_662547 |
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| Protein GI | 109899292 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.252966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT ATTTTAAAAC ATTGTTGGTT GGCGCAACGT TTGCTGCTTC TACATTAAGT
TCCAGTTTCG TTAGTGCTCA GTCCGCAGCG ATTGTTTGTC CTGGTTACAA ACGTGGCCCT
ACAAATATTC CTAGTGAGAG AACCGGTAAA AAAGTTCAAA AAGCGTTCGA AGCATACAAC
GAAGATTTGG TTGATGAAGC CCTGTCTATT TTGTATGACA TTGATACGTC GCAGACTTTT
GACCGCGCTT TTACAGACAG ATTTATCGGT AACTTGTTAG CGACTAAATC TGAATCTGGC
CCCAAGGCCT TAGAATATTT GGAAAAGTCA GTAAACGCTA AAGCGCTCAA TGACACTGAA
CAAGCTGGTA CCTTACGTTT AATTGCAGAT CTGAACATGC AAGAAAAGCG TTATGAACAA
GCTGTTAAGC GTTATCAAGA GTGGATGGAC TTTACCTGTA AAGAAGATGC TGATGTGTAT
CTTCGTATGG GGCAAGCGCT GTATGAGACG AAAGCATATG CAGATATGAT TTCGCCTCTG
AATAAGTCTA TCGCACTGGA TGATAAGCCC AACAAAAATG CATATGCATT GAAGTTGACC
TCTTATTATA GTCGTAAGAT GTATAAAGAA ACTGTGGAAG TCGCTGAGGA AATGGTGAAA
ATCTTTCCTG ACAACAAGGC GAATTGGACG CAACTTGGTT TCTTCTACAT GTTAGTTGAA
GACTATAAGA AAGGTTTGTC TACGTTCGAA ATGGCTTACG ACCAAGGTTA CTTGACGAAA
GCAGCGGAAA TTAAGGCATT GACTCAGTTG TACGCAACTA ATGAGATCCC TTACAAAGCC
GCTGTGGTAT TCGAAAAGAA CGTTGAAAGT GGTTTGATCA AACGTGATGA TAAAGCACTA
ACTAATCTTG CGAACTCTTG GCATCAGGCT AAGAATCATT TGAAAGCTGC CAAGTACTAT
GGCGAAGCTG CTAAGATGAA TTCAGACCCT GACCTTTATC GCAAACAAGG TACGTTATTG
CTAACGGCTG AAAAGTACAG TGATGCACTT GCTGCCCTTC AAAAGGCATT GGATGAGGGC
GCAGATGATC GCGGTCGTAT TCACATGGCC ATGATGGAAG CGAACTTTTA TACAGGCAAA
TACAGAAGTG CTTACAAGCA CGTCTTAGAA GCCAAAAAGG ACAAATCAAC TTCACGCAGT
GCGAGAAGTT GGGAACCTTA TATAAAAGAG AAAGCGAAGA ATCGCGGTAT TACGCTTTAG
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| Protein sequence | MNKYFKTLLV GATFAASTLS SSFVSAQSAA IVCPGYKRGP TNIPSERTGK KVQKAFEAYN
EDLVDEALSI LYDIDTSQTF DRAFTDRFIG NLLATKSESG PKALEYLEKS VNAKALNDTE
QAGTLRLIAD LNMQEKRYEQ AVKRYQEWMD FTCKEDADVY LRMGQALYET KAYADMISPL
NKSIALDDKP NKNAYALKLT SYYSRKMYKE TVEVAEEMVK IFPDNKANWT QLGFFYMLVE
DYKKGLSTFE MAYDQGYLTK AAEIKALTQL YATNEIPYKA AVVFEKNVES GLIKRDDKAL
TNLANSWHQA KNHLKAAKYY GEAAKMNSDP DLYRKQGTLL LTAEKYSDAL AALQKALDEG
ADDRGRIHMA MMEANFYTGK YRSAYKHVLE AKKDKSTSRS ARSWEPYIKE KAKNRGITL
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