| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2978 |
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| Symbol | |
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| ID | 4174748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3603170 |
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| End bp | 3604063 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638056003 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_662540 |
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| Protein GI | 109899285 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG AGTTAATTAG ACAGCTCATT GACGCAAAAG CAGGCCAAAG TGGCATGATA
GAAACCAGAA TTAGTGGCGT GCAATTGTTT AAAATAACGG AGCCAATTCG CTGTGCTCCT
GCACTGTACG AACCATCTGT TACGGCAATA GTCAGTGGTG GAAAAGAAGC CATTTGGAAT
GGCAATAAAC ATTATTATGA TAAAAATAAA TATATTTGCT GCACTATGTC TATGCCAATA
GAAGCTGGTA CCCCAGAAGC TTCACCTGAT AACCCTCTTA TGGGTGTGTA CATATCCTTA
AATACTAGAG TGATGACAGA GTTAGCCATT GAATTGGAAA GTGCTACAGG CGTGACATAC
AAAGTCAAAG AGTCTGTGCA TCCGCAAGGC ATATCCACAG CTAATTGGGA TGAGGCGTTC
ACTGACGCTC TATATCGGTT AATAATGTTA GAAAAAAGTA CTACAGATAT AGCAATACTT
GGTAGTAGCC GTATACGAGA GCTTTACTAT GCAATATTAA AAGGAGATTC AGGTTACGCG
GTCAGACGCT CATTTGGGGT AGGAAACGAA ATTGCTCGTT CGATTGAATT GCTGTCTTCT
AATCTAAACG AGTCTGTAAC AATCGAAAAC CTAGCGCATC AAGTCGGTAT GAGTCGCGCG
GTGTTTCATC GTAAATTCAA ACAAGCAACG AGTATGTCAC CTATCCAATT CGTTAAATCT
ATGAGGCTGA ACAACGCTGC CATGAAAATT GCTGAAGGGA GAAATGTTAA TGTCGCCGCC
ATGGAAGTCG GCTATGTCAG TTCATCGCAA TTCAGTCGAG ATTTTAAAAG AATGTACGGT
CAAGCTCCAA AGCAATGGAG CCAAACAATA GAAAGAAAAA ACAACAGGGT TTGA
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| Protein sequence | MSKELIRQLI DAKAGQSGMI ETRISGVQLF KITEPIRCAP ALYEPSVTAI VSGGKEAIWN
GNKHYYDKNK YICCTMSMPI EAGTPEASPD NPLMGVYISL NTRVMTELAI ELESATGVTY
KVKESVHPQG ISTANWDEAF TDALYRLIML EKSTTDIAIL GSSRIRELYY AILKGDSGYA
VRRSFGVGNE IARSIELLSS NLNESVTIEN LAHQVGMSRA VFHRKFKQAT SMSPIQFVKS
MRLNNAAMKI AEGRNVNVAA MEVGYVSSSQ FSRDFKRMYG QAPKQWSQTI ERKNNRV
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