| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2973 |
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| Symbol | |
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| ID | 4174743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3599177 |
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| End bp | 3600070 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638055998 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_662535 |
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| Protein GI | 109899280 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACAA TCGAACAATT AAAAGTGTTG AAAGCAATTG CAGAAGAAAA GTCACTAAGG
GCAGCAGCAA GTAAACTAAA CAAAACACAA CCCGCATTAA GCCATTCACT TAAGCAGCTA
GAAACACAAC TCGGATTGGA ACTATTCACA AGAGATAGCT ATAGGTTAAG CTTAACTAAC
GCAGGTAAAA CTGCGCTTCA AATGGCCCTT AAAGCTCTTC GAGAGGTATC GTTGATTGAA
CAATATGCAA ATCACTTAAA TCTAGGAAAT GAAGCAAAAG TCATTATTGC TATAGAAGCA
GCATTCCCTA TTGAACCGCT TTTTCCGGTA TTTGAACAAA TAAAAAACCA ATTCCCTTCG
ACTCAACTTT CTTTAACTCA AGAATATGTA ACCGGCGCTT TACAACTTGT GGCGGAGGGT
AAAGCACAAT TAGCCGTGAC TGGTGCCCCA ATTGATTACT TAGCCAAGTC TAGCGAACTT
TTCTCAAAAC AGATCGCAGA AGGTGAGTTG ATTAACGTAG CAACACCACA AATGCTAGAA
AGATATCAAC CATTGGATTC AATAGAAGCG CTTGTCAATG AAAATCAGAT CATAGTGAAA
GACACAGGTA AAATAACGCA GGACAATTAT TTCAACACAC AAACAGGACA AAAGCGCTGG
TACGTAAACA GCTTTGAAGC GAAGCATAAA CTCATATCCC ATAGTCTAGG TTGGGGAATG
TTGCCTGAAC ATTTCATTTC TAATCAATTA GCTTCGGGAG CCTTACAGAA AATTAGGGTC
GCAGATAAAA AATGTTCAAG TACGTTTCCA TTTTATTTGA TAAAAAATAA ATCAAAAATC
CTTGGTCCAG TAGCGACTGA AATTTGGAAT GCCTTCTCAG AACTCAAGCT TTGA
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| Protein sequence | MITIEQLKVL KAIAEEKSLR AAASKLNKTQ PALSHSLKQL ETQLGLELFT RDSYRLSLTN
AGKTALQMAL KALREVSLIE QYANHLNLGN EAKVIIAIEA AFPIEPLFPV FEQIKNQFPS
TQLSLTQEYV TGALQLVAEG KAQLAVTGAP IDYLAKSSEL FSKQIAEGEL INVATPQMLE
RYQPLDSIEA LVNENQIIVK DTGKITQDNY FNTQTGQKRW YVNSFEAKHK LISHSLGWGM
LPEHFISNQL ASGALQKIRV ADKKCSSTFP FYLIKNKSKI LGPVATEIWN AFSELKL
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