| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2962 |
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| Symbol | |
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| ID | 4174730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3585380 |
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| End bp | 3586300 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055985 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_662524 |
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| Protein GI | 109899269 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATC GACTGCAAGA GTCTGATATA AAACTTTTAC GTGTGTTTTA CGCCGTTGCT
TCGTGTAATG GCTTCACGGC GGCCGAGTCT GTATTGCGTA TGCAGCGCCC GAACATCAGT
GCTGCTATCA AGAAGTTAGA AGATCGCCTC GATCTTGTGT TGTGTCATCG CGGACGCGGT
GGTTTCCAGA TGAGTAAAGA AGGTGAGGTT GTCTTTCAAG AAACCAAACG TATTTTCAAC
TCATTCGATA ATTTTGTATT CAACTTAAAA AGCTTGCACG ACGATTACTC AGGGCATATT
ACTTTAGTGA TGATGGCTGG CTTGCCGCTC AATTATCATC TTGCGGTGAG TAAAGCAGTC
AAAAGCACCA TGAAAAAATT CAACGATATA CACGTTAATA TTCAAACGCG TTTATACAAC
GAAGTTGAGC ATGTGGCGTT GTCTGGTGAA TGTCATTTAG TGCTGTCAAC TTATGATATG
GTCAAGCCTG AGTCGGTCAC ATTTCATCCC ATAGATGTGA AATGTCGCGG GCGACTATAT
TGCGCGCCGA CGCATCCGTT GGCAAAGTAC GCAGACGGCT TACCTGATAC GGTGCGTATC
GATGATTACC CTGCTATTGG TATTTCTGGA TTGTCGTCTG GAAACTACAT TGACGGTGAG
CGACGCTTGT CTATTCAAAC CTTTTCAGAC TCGTACGATG GTTGCTTATC AGCAATCATG
ACGGGTGAAT ACATGGGGTT GCTGCCTGAT TACATGGTTG AACATCAGGG CAAAGACTTA
GGATTGGTGT CGATCAAAAA TCGTCAGTTT GAGTTCAATC ACGAGTTGTT CATGATGAAC
GGTAAAAATA CGCGCTTGAA TCCTGTTCTG CGCCATCTGA TAAAAGAAGT GGCTTATTTT
ATTCAGCAAA CCGAAAAGTA A
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| Protein sequence | MINRLQESDI KLLRVFYAVA SCNGFTAAES VLRMQRPNIS AAIKKLEDRL DLVLCHRGRG
GFQMSKEGEV VFQETKRIFN SFDNFVFNLK SLHDDYSGHI TLVMMAGLPL NYHLAVSKAV
KSTMKKFNDI HVNIQTRLYN EVEHVALSGE CHLVLSTYDM VKPESVTFHP IDVKCRGRLY
CAPTHPLAKY ADGLPDTVRI DDYPAIGISG LSSGNYIDGE RRLSIQTFSD SYDGCLSAIM
TGEYMGLLPD YMVEHQGKDL GLVSIKNRQF EFNHELFMMN GKNTRLNPVL RHLIKEVAYF
IQQTEK
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