Gene Patl_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2947 
SymbolntpA 
ID4174715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3568673 
End bp3569056 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content46% 
IMG OID638055970 
ProductdATP pyrophosphohydrolase 
Protein accessionYP_662509 
Protein GI109899254 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.214504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGCC AAGATGATCC TAACTTTTGG CAGTCGGTGA CCGGTACGCT GGAAATCGGC 
GAGTTGGCTA TCAATACCGC CCTAAGAGAA GTCAAAGAAG AAACCGGCAT TGATATTCAA
CAAGCGGGTT ATCACTTACA CGATCATCAG CAGATAAATC GTTACGCCAT TCGTGACATC
TGGCAACATC GCTACCCGCC AAACACGCCC TTTAATACCG AGCATGTATT TTCAATACAA
GTAAAGGATG ATGTAGCTAT TATCCTCACC GAGCATTTAG CCTATCAATG GTTAGAAAAA
AACGCTGCCA TGGCTAAAGT CTGGTCTGAT ACAAATCGGG CTGCAATCAA AGATTGCGTA
CCCGATGCGA ACATGCCAAC GTAA
 
Protein sequence
MQRQDDPNFW QSVTGTLEIG ELAINTALRE VKEETGIDIQ QAGYHLHDHQ QINRYAIRDI 
WQHRYPPNTP FNTEHVFSIQ VKDDVAIILT EHLAYQWLEK NAAMAKVWSD TNRAAIKDCV
PDANMPT