| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2902 |
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| Symbol | |
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| ID | 4174661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3513966 |
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| End bp | 3515207 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055916 |
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| Product | beta-lactamase |
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| Protein accession | YP_662464 |
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| Protein GI | 109899209 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.684015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATA TGAATAAATT CACTCAGTTC GGCCTACATG CAAGTCGTTT TTTGTCCTTA
TCTTTAACGT TATCAATATT CACCACTGGC ATAATAATCG GTCATGCTTC TGCCGATACA
CGTTCTGATG ATGCGTTTAT CGAAAAGAGT AAATTAGTGG AGCGCAGCAG TGAAATACTC
TTTTGGACCC AAGAGGAGCG TGCGATCGGT TTTAAAAACA TTAGCAGAAT GTGGCCGACG
CGAGTGGTTG CAAAATCTAA AAATGCACAA CCCATGGTGT TAAATGATCT CGGTCTAGGA
AGTGTTACCT ACCAGGTTGG AGAAACGAAG TATACCATCG AAGATTTCAT TGCTCTTAAA
GGCGCGATAG GGATGGTGGT GCTAAAAGAC GGTGAGTTGG TATACGAAAA TTACACAGAA
GGAAATGATA AGAACACCCG CTGGATATCG TTTTCAGTCA CTAAATCGGT TTCATCGTTA
CTGATTGGCG CTGCAATCAA AGATGGCTAT ATAGCAAGCG TAAATGATCA GATGGTTGAC
TACTTGCCTC AGCTGAAAGG CTCGGCTTAC GAGGGCGTAA CCATTAAAAA TGTGCTGCAC
ATGAATTCTG GCGTTCAGTG GAACGAAGAT TACAGCGACC CAAATTCGGA TGTGTCAAAA
GCAGGCGGAG CAAATGGCAT AACATTAATT AACTATGTCA AAGCGCTTTC AAGAGCGCAC
GAGCCGGGTA CCGTGTTCAA TTACAATACT GCAGAGTCGA ACTTGATTGG CGAGCTTTTA
CGCTCAGCGA TTGGTAACAA TGCTGCTACC TATTTACAAG ATAAAATATG GCAACCCTAC
GCCATGGAAA ACGATGCGTT TTGGGTACTT GATAGACCAA ACGGTGTTGA AACCGGTGGT
TGTTGCTTAC TGGCTAGCCT GAGAGACTTT GCTCGGCTTG GGCAGTTCGC CTATGAACAA
TTGTCGTCAC CGCTCAATTC ACCATTGCCG GTCAACTGGG TAAAAGACTC GATAACGCCA
TCGACCACGT ACCCTCATTA TGGTTACCAA TGGTGGTTAG AAACTGGCAA CGAGAAGTTT
CGCGCATCCG GTATTTTTGG CCAATCAATT GCCATTTATC CTGAGCTCGG AGTCGTTATA
GCCAAACATG GCAACACTCC CCAGGCCACA GGGTCTAGCG TATTTAAGGA ACACGAAAAA
GCGCTAGATG CAGCTATATT AGCAAGGATT AAAGCACTAT AG
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| Protein sequence | MKYMNKFTQF GLHASRFLSL SLTLSIFTTG IIIGHASADT RSDDAFIEKS KLVERSSEIL
FWTQEERAIG FKNISRMWPT RVVAKSKNAQ PMVLNDLGLG SVTYQVGETK YTIEDFIALK
GAIGMVVLKD GELVYENYTE GNDKNTRWIS FSVTKSVSSL LIGAAIKDGY IASVNDQMVD
YLPQLKGSAY EGVTIKNVLH MNSGVQWNED YSDPNSDVSK AGGANGITLI NYVKALSRAH
EPGTVFNYNT AESNLIGELL RSAIGNNAAT YLQDKIWQPY AMENDAFWVL DRPNGVETGG
CCLLASLRDF ARLGQFAYEQ LSSPLNSPLP VNWVKDSITP STTYPHYGYQ WWLETGNEKF
RASGIFGQSI AIYPELGVVI AKHGNTPQAT GSSVFKEHEK ALDAAILARI KAL
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