| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2872 |
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| Symbol | |
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| ID | 4174631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3485020 |
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| End bp | 3485739 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055886 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_662434 |
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| Protein GI | 109899179 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTAA AAAAGCAAGG GCGTAGAAGC GCCGAAGATG CAGAGCAAAC CAAATCAGAC
ATATTAGAAG CCGCGGCTGA ATTGTTCTGT GAGCTCGGAT TTGAGCGTGT TTCTTTGCGA
AACATCAGTG ATAAAGCCGG GGTGTCTCAT AGTCTGATAC GTCATCATTT CGGCAGCAAA
GAAGAGATCT GGCACGCAAT CAGTGACGAA CTGCATGAAT TTATTGTTCG GTATGTGGCT
GTGGTCTACC AAAATATGTC TAAAACAGTC CCGGCTAACG TGCAGCTGTT CGAATTTGCT
AAGCGTATGC TGGCATATAT GTTGGTATTT AAACGTCCTG TTCAGTTAAT GGCGGATGCC
GTGCGCCAAG AAGATGCCCT GCTCGACTAC TTCATTGGCA GTAGCGACGA TATTGAAAGT
TTTGTGGAAG GGCTGGTAAG CGCTCACAAT ACCGCTTTCC CTGAAGCACA TATTCGCATG
TGGGATTTAA AGTGGCAGAT TGTAATGTAT TCCCATGCCG CAGCATCCCT AACGCCGTTT
CTAAAGGAAA CTTGGTCTGA CGAAACTGAC GATCTCGACA CCTGCTTACT GCGACACTTT
ATGTTGTTCG AACAGACCAT GGCTGCAAGG TTAAAGATCG ATAATGGCTA TCGCAGCATC
CCGAACAGTG TAAAAGAGTT GGTTTATGAA TTACCTTGCT CGGTAACGCC AGCGGAATAG
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| Protein sequence | MNVKKQGRRS AEDAEQTKSD ILEAAAELFC ELGFERVSLR NISDKAGVSH SLIRHHFGSK
EEIWHAISDE LHEFIVRYVA VVYQNMSKTV PANVQLFEFA KRMLAYMLVF KRPVQLMADA
VRQEDALLDY FIGSSDDIES FVEGLVSAHN TAFPEAHIRM WDLKWQIVMY SHAAASLTPF
LKETWSDETD DLDTCLLRHF MLFEQTMAAR LKIDNGYRSI PNSVKELVYE LPCSVTPAE
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