| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2854 |
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| Symbol | |
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| ID | 4174613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3460510 |
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| End bp | 3461055 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055868 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_662416 |
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| Protein GI | 109899161 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.520959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGCACT TGGAGCGCCA GACATTGAAA GCACAAATTG CCGAAAGTTT AGAGGCTGCC
TTTAGCCAGT ATGGTTTCGC TGAAGCCAGC GTTTCACAAT TAAAAACAGC CTGTAACGTG
AGCTTGCGTA CACTATACAA ACATTATCCT TCAAAAGAGT TAATGATTGT CGCGGCCTTG
ACCCACAGAC ATCAGCGCTA TTTAGCTTTT TTAGCAGATG CCCGCATTAA AGATGGCAAA
GAGGCGATTT TAGCGGTTTT CGAGAGGCTT GATCAGTGGA TGACAGAGTT TGCCCCCCAT
GGGTGTATGT CGTTGCAAGC GTTAGCGGCA TTCCCTGACA ACCTCGAAAT AAAAGCGGCG
GTTTCACAGC ACAAAAACGA TGTACGTTTA CTGTTAGCTC AACGAGCTCA ACGGCCTCAC
TTAGCCACAG CGTTACTGTT ACTTCACGAG GGAGTCTCTA ATGTGTGGCC TATATTAGGC
TACGAATCTA TCGAATCTGC AAAATTATCA GTTCAACAAA TGATGGAGCA AAATGAACAT
GCCTAA
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| Protein sequence | MPHLERQTLK AQIAESLEAA FSQYGFAEAS VSQLKTACNV SLRTLYKHYP SKELMIVAAL
THRHQRYLAF LADARIKDGK EAILAVFERL DQWMTEFAPH GCMSLQALAA FPDNLEIKAA
VSQHKNDVRL LLAQRAQRPH LATALLLLHE GVSNVWPILG YESIESAKLS VQQMMEQNEH
A
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