Gene Patl_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2850 
Symbol 
ID4174610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3454851 
End bp3455354 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content41% 
IMG OID638055866 
Producthypothetical protein 
Protein accessionYP_662414 
Protein GI109899159 
COG category[S] Function unknown 
COG ID[COG3184] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAC GAATTTTACT GTTAACCTTA TTATGCATCA TTTTTGGCGC TCAGGCCGAG 
ACCAAAGCGA GCCGTGAATC GGTTGAAAAA TTGATGCTGT TAACGGATGT ATCGAAAATT 
ATGGATGCGA TGCAGGGTCA GGTGAGCGCT ATGTTTAATA ACATGGCCAC TCAAATGAAT 
ATTTCTGAGC CAGAAAGGCC CGCCTTTGAA AAATACATGG GCAAGATTGA TCAATTGCTC 
AAAGAGAAAA TGACCTGGGA GCAATTTAAA GAGCCCATGA TCAATGTGTA CTTAACGCAT 
TTTAATCAGC ATGAAATTGA TGGTTTAATT GAATTTTACA AATCAGATGT CGGTAAAAGC 
ATGACACAGA AAATGCCTTT AGTAATGCAA GACTCAATGA TGGCGGGTCA ACAAGCTATG 
CGCAGTTTAA TGCCTGAAAT ACAAGCAATT GCTCAAGACA TGCAGAGCGA AATACAACAG 
GCTCGGCAGC AAGACGGCGA GTAA
 
Protein sequence
MKVRILLLTL LCIIFGAQAE TKASRESVEK LMLLTDVSKI MDAMQGQVSA MFNNMATQMN 
ISEPERPAFE KYMGKIDQLL KEKMTWEQFK EPMINVYLTH FNQHEIDGLI EFYKSDVGKS 
MTQKMPLVMQ DSMMAGQQAM RSLMPEIQAI AQDMQSEIQQ ARQQDGE