| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2834 |
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| Symbol | |
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| ID | 4174594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3436345 |
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| End bp | 3437187 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055850 |
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| Product | tryptophan synthase, alpha subunit |
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| Protein accession | YP_662398 |
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| Protein GI | 109899143 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATC AAAATGATCA TAATGACATC CATAGCAGCG ACCGTTACGA CAGTATGTTC
ACCCGTTTAG ATGCAGCGAA TGAAGGCGCA TTTGTCCCTT TCGTGATGCT AGGTGACCCT
GACATCGCCA CGTCCCTAGA GATTTTAAAA GCCTTGGCTG AAGGCGGCGC AGATGCTCTT
GAGTTAGGTA TTCCTTACTC TGATCCTATT GCCGATGGCC CTACGATTCA GCAAGCGAGC
ATTCGTGCCC TGAGTCATAA AATTCACCCC AGTGATTGTT TTGAGGTGAT CCGTCAATTC
CGTGAAATCT ACCCTGATAC ACCTATTGGC TTGTTGCTGT ACAGCAACTT AGTGATTAAG
CCCGGTCTTG AAAAATTCTA TAACGATGCA GCTAATGCAG GTGTTGACTC GATTCTGATT
GCTGATGTGC CACTTCGTGA AGCAGACCGC TTTGTTGCTA TTGCCAACGA AACAGGTATT
AAGCAAATCC TGATTGCTCC GCCTAACGCC AGTAATGAGA CCTTGGCTGA GATCGGTCAA
AAATCACAAG GTTACACTTA CTTACTTGGC CGCGCTGGCG TAACCGGCGC TGAAACAGCT
GCCACCATTC CTGCCAGTGA GTTGATTGCC AAGTTGACTC AGTACAAGGT GGCTCCGCCA
CTATTAGGCT TTGGTATCTC TAAACCTGAG CAAGTCAAAG AAGCGATTAG CGCAGGTGCA
GCCGGCGCTA TTTCAGGCTC GGCAACAGTG AATATCATTG AAAAAAACCT GTCTCAGCCT
GAAGTGATGC TTAGCAAGCT TCGTGAGTTT GTTAGCGCTA TGAAACAAGC AACTAAAAAA
TAA
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| Protein sequence | MSNQNDHNDI HSSDRYDSMF TRLDAANEGA FVPFVMLGDP DIATSLEILK ALAEGGADAL
ELGIPYSDPI ADGPTIQQAS IRALSHKIHP SDCFEVIRQF REIYPDTPIG LLLYSNLVIK
PGLEKFYNDA ANAGVDSILI ADVPLREADR FVAIANETGI KQILIAPPNA SNETLAEIGQ
KSQGYTYLLG RAGVTGAETA ATIPASELIA KLTQYKVAPP LLGFGISKPE QVKEAISAGA
AGAISGSATV NIIEKNLSQP EVMLSKLREF VSAMKQATKK
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