| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2801 |
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| Symbol | |
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| ID | 4174561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3400860 |
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| End bp | 3401855 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055818 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_662366 |
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| Protein GI | 109899111 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGCT TTGTTTTTTC CGTGATGATG CTTATCTGTG GTTCGCTAAT GCCTCTATTC
TTGCACGGGG AACCTCAGAA AAGCCAAGCG GGCTTTGAGC TGTATATTCA AAGCTTCAAA
CAAGAAGCCC TGAGCAAAGG ATACGATGAA ACGTTTTTAG ACTCAGTCTT TACTGGCGCG
ACGTTTCGCC AACGTGTGGT AAAAGCAGAT AAAAACCAGC CGGAACGAAA AATCACTCTG
GATACTTATT TAGCAACACG TGTACCTGAT TGGAAGGTCC AGCAAGCACT GGATTTATCC
GCGAAACACC GTGCGGTACT TGAAGATGTT GCGCAAACGT TCGGCGTTCA AGCGCGGTTT
ATCGTGGCAC TTTGGGGCAA CGAAAGTAAC TTCGGCAAAA TTATGGGTAA ATACCCAGTG
ATTTCATCGC TGGCGACTAT GGCGTATGAA GGTCGCCGTG AAGAGATGTT TAAGAAACAG
CTATACGCCG CAATGGACAT CTTACGTCAA GGTCATATTA AGCAAGATGA ATTCTTGGGC
TCATGGGCAG GCGCAATGGG CCAGAGCCAG TTTATGCCAA CGTCGTTTTT ACATTATGCC
TATGATTTTG ATGGTGACGG TAAAAAGGAC ATTTGGAACA ACCCTGCTGA TGTATTCGCC
TCTATTGCCA ACTTTTTAAA GACAGAAGGC TGGAGCGACA AGGGAACATG GGGCCGTCAG
GTTAAATTGC ATGATGGCTT TGATATTTCA TTGGCTGGCT TAGACAAAAG CAAAATGCGC
ACCCTAGATG ATTGGCAAGC GCAAGGCGTG ACTAAATACG ACGGAAGTGC CTTGCCAAAT
GTGAATGTGA AGGCCTCGCT GATAATGCCT GATGGTAAGA AAGGCCGCAT TTACTTGGTT
TATGATAATT TTCACACCCT AATGGGCTGG AATCGTTCTA GTTATTTCGG TGTGGCGGTC
GGGTATTTGT CTGATCGAAT TAAGAAAGGG CGTTAA
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| Protein sequence | MSRFVFSVMM LICGSLMPLF LHGEPQKSQA GFELYIQSFK QEALSKGYDE TFLDSVFTGA
TFRQRVVKAD KNQPERKITL DTYLATRVPD WKVQQALDLS AKHRAVLEDV AQTFGVQARF
IVALWGNESN FGKIMGKYPV ISSLATMAYE GRREEMFKKQ LYAAMDILRQ GHIKQDEFLG
SWAGAMGQSQ FMPTSFLHYA YDFDGDGKKD IWNNPADVFA SIANFLKTEG WSDKGTWGRQ
VKLHDGFDIS LAGLDKSKMR TLDDWQAQGV TKYDGSALPN VNVKASLIMP DGKKGRIYLV
YDNFHTLMGW NRSSYFGVAV GYLSDRIKKG R
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