| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2776 |
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| Symbol | |
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| ID | 4174536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3368833 |
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| End bp | 3369555 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055793 |
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| Product | ABC transporter related |
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| Protein accession | YP_662341 |
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| Protein GI | 109899086 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000244167 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCAAC CGTTGCTAAA AGTACGACAG GCGAAAAAGG TTTATACCAT GGGGGATGAA
AAGGTATGGG CGCTAAAAGG TGTTGATTTA GATATTCATC AAGGTGAATT TGTGGCCATC
ATGGGCAGCT CTGGCTCAGG TAAATCTACC ATGATGAATT TGCTCGGGTG TTTAGATATT
GCCAGTGAAG GCAGTATTGC TTTTGCGGGC CAAGAATTAT CAACCCTAAG TAAAAATGAA
TTGGCCAGCG TGCGCAATCA GCGTATTGGC TTTGTGTTTC AGCAATTTAA TTTATTACCC
AGAACCAGTG CCTTAGACAA CGTCACTTTG CCACTGTTGT ATAGCAAAGT GCCAGAAGCA
GATTGGCACT CGCGTGCTCG GCAATGCCTT GAAAGCGTTG GGCTTGCGTC ACGTATGGAT
CATCATCCTG GGCAACTTTC AGGTGGCCAA CAACAGCGAG TAGCGATTGC GCGTGCACTG
ATCAACGACC CGTTGATGAT ATTGGCTGAT GAGCCTACAG GTGCCCTTGA TACGCAAACG
GGCTTAGAAG TGATGGCGCT TTTTCAAGGG CTTAATCAAC AAGGAAAGAC CATTATCTTG
GTGACCCACG AGCCGGAAAT TGCTCAATTT GCTAAGCGTA AACTGACTTT TCGCGATGGA
GAGCTCATCA GTGACGAGCA AAATACCAAT GTGCGTCAGG CGGCGTTAGA GGGCAACGTA
TGA
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| Protein sequence | MSQPLLKVRQ AKKVYTMGDE KVWALKGVDL DIHQGEFVAI MGSSGSGKST MMNLLGCLDI
ASEGSIAFAG QELSTLSKNE LASVRNQRIG FVFQQFNLLP RTSALDNVTL PLLYSKVPEA
DWHSRARQCL ESVGLASRMD HHPGQLSGGQ QQRVAIARAL INDPLMILAD EPTGALDTQT
GLEVMALFQG LNQQGKTIIL VTHEPEIAQF AKRKLTFRDG ELISDEQNTN VRQAALEGNV
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