| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2764 |
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| Symbol | |
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| ID | 4174524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3356551 |
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| End bp | 3357216 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055781 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_662329 |
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| Protein GI | 109899074 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAT TTACGATTCA TCAAGGGGTT GCAGCCCCTA TGCTGCAAAT TAATATTGAT
ACCGATGCGA TTATCCCCTC GCGGGAAATG AAGCTGGTAT CAAAGCAGGG TTTAGGCGAG
GGCTTGTTTG CCGGTTGGCG TTACACCTTA CCCAATGGCC GTGAGCCCAG CGCTGATTTT
GTACTCAACC AAATGCAATA TAAAAACACC AGCATTTTAC TCGCTGGGGA TAATTTCGGT
TGCGGCTCAT CAAGAGAGCA TGCGGTATGG GCGCTAAAAG AATACGGGAT CAAAGCGGTA
ATAGCGCCAG GTTTTGGTTC CATTTTTTAT CATAATTGCA TCAGAAACGG CATTTTGCCT
GTGGTGCTTG AAAACGATGA GGTACTGGCT TTAGCTAAGC ATGTTGAGCA GAACCCTCAG
ACGAGTCAGG TGCATATAAA CTTGCTTAAA TGTGAGGTGA GCGCGGTCGA TGTGAGCTCG
CCAAGCACCG CTGATGATGC GAGCGCATCT ACTGTTAAAA GCCCGCAATT CAGCTTTTCG
ATTTTACCGG CCCAGCAGGC CATGTTGCTA GAAGGGCTAG ATGGTATTGC GCTAACGCTG
AAATCAAAGT CAAAAATACA AAACTTCAAA CAGGCTTATC AGCAACAGTA CCCGTGGTTG
GCCTGA
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| Protein sequence | MDKFTIHQGV AAPMLQINID TDAIIPSREM KLVSKQGLGE GLFAGWRYTL PNGREPSADF
VLNQMQYKNT SILLAGDNFG CGSSREHAVW ALKEYGIKAV IAPGFGSIFY HNCIRNGILP
VVLENDEVLA LAKHVEQNPQ TSQVHINLLK CEVSAVDVSS PSTADDASAS TVKSPQFSFS
ILPAQQAMLL EGLDGIALTL KSKSKIQNFK QAYQQQYPWL A
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