| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2734 |
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| Symbol | |
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| ID | 4174494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3328353 |
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| End bp | 3329276 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055751 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_662299 |
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| Protein GI | 109899044 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.562399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTAG ATAAATCATA CCTAGAATAC GCTCATCGCG GTCATGGCAT GGATCACGAC
CGTTACGATT GGTCGATGCT CACTGACAGA CCCAAAGTCA CTTGGCCTGG CGGTAAAAAG
CTGGCATTGT GGGTGAATGT TCCGTTGCAG TTTTTCCCGC TGGATCAAAA AGGTGAGCCG
TTTAAAATTC AAGGCGGCAT GACCATGCCT TACCCTGATC TGCGTCATTT TAGTTTGCGT
GATTACGGTA ACCGGGTGGG TATTTTTCGT TTTTTAAAAG CGTTTGATAA ATACGGTGTC
ACCCCGACCT TTGCCATGAA CACCGAGCTA GCCAAGCGTA ATCCCTATTT GCTCAATACC
ATCAAAGAGC GGGGCAATGA AGTGATGTGC CACGGCATGC ACATGGACGC CCTGCATTAT
GGCGGCCAAG ACAAACATGC CGAAACCCAG TTAGTACAAG ACTCGTTATC GCAACTACGG
GAGTTAACCG AGCAAAACAT TACAGGTTGG TTGAGCCCTG GGCGCAATGA AAGTGAGAAC
ACCCCAGAGC TTTTAGCCGC TAATGGCGTT GAATACTTTT GCGACTGGGT GAACGATGAT
ATGCCCTATA CCTTTAAGAC GCAGCAAGGT CATTTATGGG CCATGCCATT ATCCAATGAA
TTAGACGATG CCTTTATCAT GCTCAATAAT TTACACAGTG AGGATGCCTA CGCAGAGCAA
ATGATTGATG CCTGTGATTT TCTACTTAAA GAGGCGAACG AGAGTGGCGG GCGAATTCTA
AGCTTAAATA TTCACCCTTG GATGCTAGGG CAACCCCACC GCATTGGCGC CCTCGAGCGC
GTACTTGAAT ACGTGATGAG TCAAGATGTG TACAGCGCAA GCGCCTGTGA AATTCTGAGT
GCTTTTAAAA GCATTCCACG TTAA
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| Protein sequence | MALDKSYLEY AHRGHGMDHD RYDWSMLTDR PKVTWPGGKK LALWVNVPLQ FFPLDQKGEP
FKIQGGMTMP YPDLRHFSLR DYGNRVGIFR FLKAFDKYGV TPTFAMNTEL AKRNPYLLNT
IKERGNEVMC HGMHMDALHY GGQDKHAETQ LVQDSLSQLR ELTEQNITGW LSPGRNESEN
TPELLAANGV EYFCDWVNDD MPYTFKTQQG HLWAMPLSNE LDDAFIMLNN LHSEDAYAEQ
MIDACDFLLK EANESGGRIL SLNIHPWMLG QPHRIGALER VLEYVMSQDV YSASACEILS
AFKSIPR
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