| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2733 |
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| Symbol | |
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| ID | 4174493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3327340 |
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| End bp | 3328353 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055750 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_662298 |
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| Protein GI | 109899043 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.437035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCG ATCCTGGATT TTACGACTAT TGGCCTTACG AAAATCGCCC GAAAATTCGT
TGGCCCGGCG GTAAAAAAAT GGCCTTTTGG GTGGCGCCGA ATATTGAGTT TTATGAACTG
AATCCGCCAG CTAACCCATC TCGCAAAGCG TGGCCGCAGC CCTACCCAGC CACACAAGGC
TACAGTATCC GTGATTACGG CAATCGTGTG GGCCATCAGC GGCAAATGGA CTTACTGGAT
AAATACGGCA TTCGCGGCTC TATTTCGTTA TCAACTGCCC TTTGCGATCA CCACCCTGAA
ATTATTCAAA TGTGCAAAGA GCGAGATTGG GAGTTTTTCA GCCACGGCAT TTACAATACA
CGTTACACCT ACGGCATGTC TGAGCAGCAA GAGCGCGACA TGATCAAGGA TTCAATGCAA
ACGATTTATC AGCACACAGG GCAAAAGTGT GCTGGCTATT TGGCACCAGC GCTGTCCCAT
TCAGAGCTTA CCTTAGATTT ATTCGCTGAA GTAGGCACAG AGTTGTTTGG CAATGAAGGC
GGTATCTATA CCTGTGATTT ATTTCATGAC GATCAGCCCA CCCCCATACA CACTCGCAGT
AATAAACCGT TTGTGTCTAT TCCTTATTCA CTGGAAATGA ACGACACCAT TGCCTTTGTA
GTGAACAAAA TTGAACCCAG ACGTTACGGC CAGATGCTCA AGAAAAACTT TGATCGACTT
TACGCCGAAG CGGACGAATC AGGCACCATT ATGTGTATTC CTACACATAA TTATCAGGTG
TCTTGCCCAC ATCGTATGAA GGCATTTGAA GAAGCGCTTG ATTACATCAC CAGTCACGAG
GATGTATGGG TGACCACAGG CAAAGAGATT GCCGATTACT ACCTTGAGCA TTACTACGAG
CAAGCTAAAA CAGACATTGC GCAAAAGAAC GCGGCTGCCT TAAATAACGC TGTAGCCTTG
AATAACGCTG TGGCCTTGAA TACTCCTGTA GCCCCGAACA AAGGAGCGAA ATAA
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| Protein sequence | MKSDPGFYDY WPYENRPKIR WPGGKKMAFW VAPNIEFYEL NPPANPSRKA WPQPYPATQG
YSIRDYGNRV GHQRQMDLLD KYGIRGSISL STALCDHHPE IIQMCKERDW EFFSHGIYNT
RYTYGMSEQQ ERDMIKDSMQ TIYQHTGQKC AGYLAPALSH SELTLDLFAE VGTELFGNEG
GIYTCDLFHD DQPTPIHTRS NKPFVSIPYS LEMNDTIAFV VNKIEPRRYG QMLKKNFDRL
YAEADESGTI MCIPTHNYQV SCPHRMKAFE EALDYITSHE DVWVTTGKEI ADYYLEHYYE
QAKTDIAQKN AAALNNAVAL NNAVALNTPV APNKGAK
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