| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2730 |
|---|
| Symbol | |
|---|
| ID | 4174490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3324148 |
|---|
| End bp | 3325416 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638055747 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_662295 |
|---|
| Protein GI | 109899040 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.184055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA GCAATGCGTT ACCCTCGTGG GACGTGCTTA CCAAGCACGA TGTGTTTCCG
GTAGCGAGTC ACGATGAAGT GGCTCGATTG AATTTTCTGA CGCACCTTAA CGTGCATTTA
AGCAGCCAAA TATTGCCCGG CGTTAAAACC GCTTATGAAA AGCAGGTAAA ACCTGCCATT
ATCGCGCAAA CAGGCAAAGA GCCAACGTCA CGTCATGACG TGCGCAAACA TATGTTGAAC
AACGGCTACT TTCAAATGTG GAGTGCGCTG CGGCGTAATA CCATGGAAAT GCGCCACCAA
GCCGCACGCT CTCAAGTGCT TGGGCAGATT GAAGGCATAG TGGCAAAGGT GGATAAAGCC
TGTGAAAACG ATGGCAACAT CCAGCTAGAT AACAGCGTGA GTATTCCGCC GAATGTGGGC
TCTGTGGATA TACATTGCCA GCCAGGGTGT TATTACCAAG AATATTTTGA GAACGATGTC
ACTGTAGCGG CAAGTTACGA TTTAGGCCTG TTTGTGACCA CAGCCGGTTT ATTAGGCGCG
TTAAGTGACG GTGGCGGGCA GGGCATCGCC AACTGGCTTA AAACTCAGCA CCCAGATTTT
GCCCCTAAGC GTATTCTGGA TATTGGTTGT ACCGTTGGGC ATAACGCATT GCCTTTGGCC
GAACACTTCC CTGATGCAGA GGTGATTGCG GTAGATGTGG CGCGCCCAAG TTTGCGATAC
GCCCATGCTC GCGCCAAATC GCTAGGGTTA AGCAATATTC AATTTGTACA AGCCAATGCT
GAAGATCTCA GTCAATACGA TGACGGCTCA TTCGATTTAA TTACCACCTC GATGTTTTTA
CATGAACTAT CACATCAGTC TTTACCTAAA ATCCTCAAGA GCATCAACCG CTTGCTAGCG
GATGGCGGCT TGAACTTGCA CCTTGAACAA CCCCAGTACA CAGGCATGGA TGTTTATCAG
CAATTTATTC GCGACTGGGA TACGTACTTT AATAACGAAC CGTATTGGGG GCCGATGCAC
GAGCTTGATT TGCCGAAAGT TTTCGCCGAA TGTGGCTTCG ATCCTAACGA TTTATTTGAT
GTTGGGGTGG TATCCAAAGT AGATGAAAAG ATATTCGGTA AGCCAAAAAC AGACGGTGAA
GATTATGGCC GCTCACCCGT GTGGAACGCC CTTGGGTTAT GGAAAGGACA GAATGTAAGA
AATAACGCGA AAAAAGATGG TAATAAAGAC GTAAACGTCG TCGAAAAGAC AAGTGAGAAT
GCAGCATGA
|
|---|
| Protein sequence | MSDSNALPSW DVLTKHDVFP VASHDEVARL NFLTHLNVHL SSQILPGVKT AYEKQVKPAI
IAQTGKEPTS RHDVRKHMLN NGYFQMWSAL RRNTMEMRHQ AARSQVLGQI EGIVAKVDKA
CENDGNIQLD NSVSIPPNVG SVDIHCQPGC YYQEYFENDV TVAASYDLGL FVTTAGLLGA
LSDGGGQGIA NWLKTQHPDF APKRILDIGC TVGHNALPLA EHFPDAEVIA VDVARPSLRY
AHARAKSLGL SNIQFVQANA EDLSQYDDGS FDLITTSMFL HELSHQSLPK ILKSINRLLA
DGGLNLHLEQ PQYTGMDVYQ QFIRDWDTYF NNEPYWGPMH ELDLPKVFAE CGFDPNDLFD
VGVVSKVDEK IFGKPKTDGE DYGRSPVWNA LGLWKGQNVR NNAKKDGNKD VNVVEKTSEN
AA
|
|---|
| |