| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2718 |
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| Symbol | |
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| ID | 4174478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3311547 |
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| End bp | 3312443 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055736 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_662284 |
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| Protein GI | 109899029 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATT TTAAATGGCC AAAAGACAAA CGACTTGCCA TGTCTATCGT GGTGAATGTT
GAAGAAGGCT CTGAGTACAG TGTCAAAGAA GGCGATAAAG GCATGGAGCC GGTGGACGAA
TTACAAGTTC ACCTCAAAAA GCCCATGCGC AATTACGGTA ACGAATCGAA TTATCAATAC
GGTATTAATG AAGGTGCACC GCGCATCATC AAACTGCTCG ATAAATACCA GATGCCTGCC
ACATGGACAG CCGCAGCCCT AAGCCTAGAG CGAGCGCCGC AAATCGCAGA GGCAATTCGT
CGTCGAAATG ATGAAACTTG CTCACACGGT TATCGCTGGG TGTTTCAATT TCGCATGGAC
GAAAACGAAG AGCGTCAGTT TATAAAAGAC GCAGTCACCA GCATTGAAAA AACCACTGGT
AAGCGGCCTC TAGGTTGGTT GTCGCGTTAC TTGCTCACCG AAAATACCCG TCGTTTGCTG
CAAGAGGAAG GCTTCTTGTA TCACATGGAT GATTACAGCG CCGACGCGCC ATTTTGGGAT
GCAGTGCAAG GTACAAATGA ACCCATGGTG ATAGTGCCGT ACGCCCTAGA TTCAAATGAT
ATGAAGATGT GGGTTGCTCC GTCATTAACA CCGGACGCCT GGTTGAAATA CGCCATTGAT
ACCTTTGATG TACTGTACGA AGAAGGCGCA GAGCAGCCTA GAATGATGAG CTTAGGGTTG
CATTTGCGCA TCATAGGTCG CCCTGGGCGC ATTGGCGCAC TTGACGCATT TTTGAAGTAC
GTGAGCGAGA AACCTGGGGT GTGGTTTACC ACTCGTCAGC AAATCGCTGA AACGTTTCAA
GAGCAAGTGC CTGCAACGAG CTACGTTCCT AAAGAGCAGG ACGGGCAAAC ATCATGA
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| Protein sequence | MSDFKWPKDK RLAMSIVVNV EEGSEYSVKE GDKGMEPVDE LQVHLKKPMR NYGNESNYQY
GINEGAPRII KLLDKYQMPA TWTAAALSLE RAPQIAEAIR RRNDETCSHG YRWVFQFRMD
ENEERQFIKD AVTSIEKTTG KRPLGWLSRY LLTENTRRLL QEEGFLYHMD DYSADAPFWD
AVQGTNEPMV IVPYALDSND MKMWVAPSLT PDAWLKYAID TFDVLYEEGA EQPRMMSLGL
HLRIIGRPGR IGALDAFLKY VSEKPGVWFT TRQQIAETFQ EQVPATSYVP KEQDGQTS
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