| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2710 |
|---|
| Symbol | |
|---|
| ID | 4174470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3301284 |
|---|
| End bp | 3302693 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638055728 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_662276 |
|---|
| Protein GI | 109899021 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCA GGCACGTTAT TAAGGGCTTA GCCGCTAGTT CATTAGTACT TGGGGCTGGT
GGAATAGCTG CGCCGCTTTG GGCCGCAAGT GACAGTCATG TTGATGTCAT TGTTATTGGT
GCAGGATTGG CTGGGCTTAC CGGTGCGCGT TATTTAAAAG AGCAAGGTTA TAATGTGCTG
GTTTTAGAAG CGCGCGCGCG AGTTGGCGGG CGCATACTTA CGGTTAATAC TCATGGCATA
AACGCGGAAG CAGGGGGGCT TCAAATTGGT CAAGGGTACG GCATGATGCG CACGTATGCC
CAGCAGCTAG GTTTGCCGTT GGTGTCTTTG GGGAATTATG CCAAACAAAA TACCTTTGTG
ATAAATGGCC AGCGCATTAG CGCAGCTGAA TGGCCTACCC ATCCGCAAAA TAAGCTCCTC
GGCGATGACA AAAAAACCTT ACCTTCAAGC TTGTATTATA AAGCGTTGGG GCAGGGGCCA
AAGTACGCGT TACCGTCTGA CTGGACGTTA GGGAAATACG CGCCCTTAGA CATTTCACTT
GAGGAGTATT TTCAACAGCA ACACTTATCA GTAGAAGCGC TACGCCTGAT AAAGGCGAAT
GTAAATGCCT CGAGCCTGCA ACAATTATCT GCCGCCGATG CCTTTTATCG TTTGAGCTTA
GCGCGAGTAG GCGCAAGAGG CGCGCAGAAA ATCCAAGGGG GCAATAGCCG CTTCACTCAA
GCACTCGCTG ATAGCGTGGG AGATGTTGTT CGTACTGATA AGGTGGTAAG CCATATCATA
GAAGGCACAG ACACAGTCAA GGTGCGTTGT GAAGATGGCA GCGAATATTC AGCTAAACGC
TGTATCATCA CCAGCCCATT TTCTGCGTTA AAGGAGGTGG CCCTTCACTG CGATATAAGC
ACCCACAAAC GTCGTGCTAT AAATGAAGCC GTTTATACGC CTGTAACACA AGTGCATTTC
GCTGTTAATA AGCAGGCGGA TGTGTCCATG CTAGAAGCGA CTAATTTATG GACGGACAAC
ACTTTGGGGC GCGTATTTAG TCAAGTCGAT GAGAGTGGTT CTCTAACCTA CTTAACAAGC
TGGATAAATG GCCCACAAGC AAAGGCCTTG GACAAGCTAC CAGCGATTGA GGCCATTAAT
GTTGTTAAGG GGGCACTCAA CACCTTTTAC CCTGGGCTTA AAGGGAAAAT CGAGGTGGTG
CACCATCAGT CTTGGGCAAA CGAGCGCTTC TCAAGGGGAG CTTATATCCA GTTCGCCCCT
GGGCAAGTGC AAACACTTGT TCCTCATATG GCAACCATTG AGGGTAAGTT GCATTTCGCC
GGTGAGCACA CTGAGTTTAT GTACTCTGGT ATGGAGTCTG CGATAGTATC GGGTTTGCGA
GCGGCACAAG AAGTCAGCGA ACGACTTTAA
|
|---|
| Protein sequence | MQRRHVIKGL AASSLVLGAG GIAAPLWAAS DSHVDVIVIG AGLAGLTGAR YLKEQGYNVL
VLEARARVGG RILTVNTHGI NAEAGGLQIG QGYGMMRTYA QQLGLPLVSL GNYAKQNTFV
INGQRISAAE WPTHPQNKLL GDDKKTLPSS LYYKALGQGP KYALPSDWTL GKYAPLDISL
EEYFQQQHLS VEALRLIKAN VNASSLQQLS AADAFYRLSL ARVGARGAQK IQGGNSRFTQ
ALADSVGDVV RTDKVVSHII EGTDTVKVRC EDGSEYSAKR CIITSPFSAL KEVALHCDIS
THKRRAINEA VYTPVTQVHF AVNKQADVSM LEATNLWTDN TLGRVFSQVD ESGSLTYLTS
WINGPQAKAL DKLPAIEAIN VVKGALNTFY PGLKGKIEVV HHQSWANERF SRGAYIQFAP
GQVQTLVPHM ATIEGKLHFA GEHTEFMYSG MESAIVSGLR AAQEVSERL
|
|---|
| |