| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2703 |
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| Symbol | |
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| ID | 4174463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3294938 |
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| End bp | 3295957 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055721 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_662269 |
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| Protein GI | 109899014 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.863974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGAC CGAGTTTATG GGCAAACGAG CTGGACTATC GACGAACTGT GCTGAAGGTA
GTCCTGTGCA TCATCATTTT CGCGGGCTCA ATCTTTGTTG TTAACAATTG GCTCAACGGG
TTCAAAGTGT ATGCGTTAAT TGAATTGGCG GTTGTTTTGT TTTCTGTAGG GCTACTCGCC
ATTCACAAGA AAACCCCCAA TCTGACGCTT TGGTCGTCCT TGTTTCTATT TACCGTTTAT
ACGGTTATTT TGATTGGTAT ATTCACCGTC GCATTTAAAG CGGCCCTTTA TACTTGGCTG
TTCTTAATCC CAGTCCTTTC TTACCTTCTG CTTGGCATCA CCCTAGGCAA CGTTTTTACC
TGTGTGTATG TCATTGCTGG CGTGGCTATT CTTTGTAGGG CTCTGTCCTT TGAATCAAGT
GAGATACCTC TGATATCGGT GGTGAACATC AGCCTATGTT TATCGGCTAT TTGGGCCTTG
TCTTACACCT ATGAATCAAA AAGAGCAGCA ATGGTTAAAC GATTGCAGCA AATGGCATCG
GTGGACCCAT TAACAGGTTT AAATAACCGG CTGTTGCTCG ATTCCAGCTT CGAGATGCTG
TGTGAAAGTC TCCCGGAACA ACAACAAACA GTGTCAATGT TACTCATTGA TTTAGACCAC
TTTAAAAAGG TCAACGACGA ATACGGCCAT GATATTGGTG ATAAGGTGCT GATTGAGGTA
GCTCGGCTTA TCAATGAAAC ACGCCGCTTA AATGACTGGG CTTTCCGCCT AGGGGGTGAA
GAATTTTGTA TGCTTATTCC AGACACCAGC GAGCAGCAGG CTAAAAATAT TGCTGAACGT
ATCCGCTTAA TCGTAGAAAA AGACATATTG ATTAATAGTA AGGACATGAA AATCAGCGTG
AGCATTGGCG TTTCACACTG GCCCGAAGAT GGTCAGACGT TGAACCAAAT TTACAAACTG
GCGGATGAGA GACTATATAA AGCTAAGGAA ACAGGTCGTA ATAAAGTCAT TGCTCACTAA
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| Protein sequence | MFRPSLWANE LDYRRTVLKV VLCIIIFAGS IFVVNNWLNG FKVYALIELA VVLFSVGLLA
IHKKTPNLTL WSSLFLFTVY TVILIGIFTV AFKAALYTWL FLIPVLSYLL LGITLGNVFT
CVYVIAGVAI LCRALSFESS EIPLISVVNI SLCLSAIWAL SYTYESKRAA MVKRLQQMAS
VDPLTGLNNR LLLDSSFEML CESLPEQQQT VSMLLIDLDH FKKVNDEYGH DIGDKVLIEV
ARLINETRRL NDWAFRLGGE EFCMLIPDTS EQQAKNIAER IRLIVEKDIL INSKDMKISV
SIGVSHWPED GQTLNQIYKL ADERLYKAKE TGRNKVIAH
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