Gene Patl_2693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2693 
Symbol 
ID4174453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3280154 
End bp3280840 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content44% 
IMG OID638055711 
ProductGntR family transcriptional regulator 
Protein accessionYP_662259 
Protein GI109899004 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA ATAGTTTGTC ACCAAAACAC GTGTTAACTT CCCCCTTGCT CACAGATCAG 
GCCGGTGTTT ACGCCAACAT TTTAAGCGAC ATTATCAATG CGGTTTTCGT CAGTGGTGAG 
CGTTTAGTGA CGACGCAATT GGCCCAACGT TATAGCACCA GTATCAACCC AGTTAGAGAG 
GCATTAAAGC AATTGCAAGG AGAGGGGTTT GTTAACGTTG CGCCAAACTC AGGTGCCAGT 
GTCTCAACTT TCACCGCAAG TGATACACGC GATGTATTTG AGGTGCTGCA ACTGCTCGAC 
CCCTACCTAA TGGAGTGGTT TGTTGAAGAG CATATTGATG AGCAGCGTCA TGAACTTGAA 
AATGTTTTAT TTGAAATGGA AAAGCTTACG TCGCTTGCTG AGCCACCTCA TGGTGTGTTT 
CGACATTTAG ACACGCAGTT TCATTGGCTT ATGTATAAAG ACCATTACAA TAAGAATGCA 
GTGGAAATCT GGCGACGTAA TAGGCTCATT TTACATGTTG CCCATGGAAG CCTGACATTG 
AGCTCTCGGC GTATTGAACA AAGTATTGCT GAGCATAAAG CATTGCTTCA GGCTCTCGAA 
GAAAGAGAGG TAGCAAAAAC CTTAAAAACG TTGAAAGCGC ATATCGCCAG CAGTGGCCGA 
TATTGGTCTC GATACCAAGT ACGTTAA
 
Protein sequence
MNKNSLSPKH VLTSPLLTDQ AGVYANILSD IINAVFVSGE RLVTTQLAQR YSTSINPVRE 
ALKQLQGEGF VNVAPNSGAS VSTFTASDTR DVFEVLQLLD PYLMEWFVEE HIDEQRHELE 
NVLFEMEKLT SLAEPPHGVF RHLDTQFHWL MYKDHYNKNA VEIWRRNRLI LHVAHGSLTL 
SSRRIEQSIA EHKALLQALE EREVAKTLKT LKAHIASSGR YWSRYQVR