| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2692 |
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| Symbol | |
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| ID | 4174452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3279114 |
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| End bp | 3280016 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055710 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_662258 |
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| Protein GI | 109899003 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATT TCGCCCACAG CTCAGTCTGT GAACAAACAT CTCGCTTTGA TTTAGCCCAT
CAAGACAGTC GCAGACGTTT CGTTAAACTC AGTGCAGCGG CTCTGGGCCT AGCAGCCATG
CCTGGTTCTA TTGCATTTGC CGCCAATATG CTAACGACCC CAGCGGCAGT TGGGCTACAA
CTGTACACCC TGCGAGATAT GATGGCAGTT AGCGTGCCCG CCACACTAAA GTTAGTCGCT
GCTGTAGGTT ACAAAGAACT AGAGTTTGCT GGTTATTTCA ATCACAAACC CAGTGAAATC
AAGACAATCC TAAACAATGA AGGTTTAAGC GCTCCTTCTG CTCATATTGG GCTCACTGCA
TTTGATGGTG GCATCGATAA AGTGATTGAT CATGCCCTAG AAGTGGGTCA TCAATACATT
GTAATTCCGT ATTTGACCGA AGAACAAAGA GGCACGGGCA TAGACGTGTA CAAAAAGCTC
GCTGAGCGTT GCAACGTGAT CGGCGAGGCA TGCAACAAAA CGGGCTTACA ACTGGCTTAT
CATAATCACG CTTTCGAGTT TGAAATGCGT GACGGTCAGT TACCGTACGA TGTACTGCTT
AACGAAACGG ATAAAAATTT AATGGCTATG GAAATGGATT TATTTTGGAT GTTTAAAGCC
AAACAAGATC CCCTCGCTTA CTTTAAGCAA CACCCAGGGC GCTTTAAACT ATGGCATGTA
AAAGATATGG ATGAAGCAGG AAACTTTGCC GATGTGGGCA CAGGAACAAT AGACTTTGCG
CCTATCTTCG CCCAATCTGC GCTTTCTGGT GTTCAACACA GATTTGTTGA ACGCGATAAA
ACAGACGACA AATTGAAAAC TATCCAGCAA GGGTACAAAG CCATGTCTAC GCTATTGGCC
TAG
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| Protein sequence | MKDFAHSSVC EQTSRFDLAH QDSRRRFVKL SAAALGLAAM PGSIAFAANM LTTPAAVGLQ
LYTLRDMMAV SVPATLKLVA AVGYKELEFA GYFNHKPSEI KTILNNEGLS APSAHIGLTA
FDGGIDKVID HALEVGHQYI VIPYLTEEQR GTGIDVYKKL AERCNVIGEA CNKTGLQLAY
HNHAFEFEMR DGQLPYDVLL NETDKNLMAM EMDLFWMFKA KQDPLAYFKQ HPGRFKLWHV
KDMDEAGNFA DVGTGTIDFA PIFAQSALSG VQHRFVERDK TDDKLKTIQQ GYKAMSTLLA
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