Gene Patl_2685 details

Gene Information

• Locus tag: Patl_2685
• ID: 4174445
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 3270772
• End bp: 3271371
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638055703
• Product: twin-arginine translocation pathway signal
• Protein accession: YP_662251
• Protein GI: 109898996
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.261354
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATGA ACAGACGCGA ATTACTTAAA ATGATTGCCG CTGCCACAGG CACGGCGTTT 
GTTAGTGCGA ACGCGATGGC CTATGTCACG TTGCCGATGA AAACCGTTCA AGAAACGGCG 
TTCTCAAAAG ATGATATCGC ATTTTTTAAT GAAGTCGGAG AGGTGATTAT TCCTCGCACG 
GATACGCCTG GGGCTAAAGA TGTCAATGTT GGCTATATGA TGGCGGTGAT TGTCACTGAT 
TGTTATACCG CTCCTCAGCA GGCTGCATTT AAAGAGGGCA TTGCATCGAT AAAGGCGTTG 
GCTAAATCAA CTTATGGTAA AGATTTTCTT CTGCTCAATA CTGAACAGCG CGCTAGCCTG 
TTAGCCTCAT TGAATGACGA AGCCGATGTA TTCAACACTA ACGCTAAATT GGCAAATAAA 
GGCGTAAAAG ACTCAGAAAA ACCTACGCCT CACGGCTTTA CGTTAATTAA GCAGCTGACA 
TTGTTTACCT TTTTCACCTC AAAAGAAGGC GCTACCAAAG TATTGCGCTA TGTGGCTATT 
CCAGGTCGCT ACGATGGTGA ATTGCCGTAT AAGAAAGGGG ATCGCGCGTG GGCTACGTAG 

 

Protein sequence

MSMNRRELLK MIAAATGTAF VSANAMAYVT LPMKTVQETA FSKDDIAFFN EVGEVIIPRT 
DTPGAKDVNV GYMMAVIVTD CYTAPQQAAF KEGIASIKAL AKSTYGKDFL LLNTEQRASL 
LASLNDEADV FNTNAKLANK GVKDSEKPTP HGFTLIKQLT LFTFFTSKEG ATKVLRYVAI 
PGRYDGELPY KKGDRAWAT