Gene Patl_2684 details

Gene Information

• Locus tag: Patl_2684
• ID: 4174444
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 3269938
• End bp: 3270702
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638055702
• Product: hypothetical protein
• Protein accession: YP_662250
• Protein GI: 109898995

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.231915
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTAA CCAAACGAAT AAGCAATCTA ACGTTAATAC TGGCCGGTGC CATATCGCTG 
AGCCAGCATG TAAACGCTGA GCAGAGCCAA GCAGAGCGTG AAGCTCAAGC GCAAAAAACC 
GAAGTGTGGG AGCCTGTCCC TAAGATTGTG TCAACCCCTG TGGGTAGAGC ACCGTCTGAC 
GCGGTGGTTC TTTTCAATGG CGATGACTTA AGTGCATGGG AAGCGCTTAA AGGCGGCGAC 
GCACCTTGGA GTATCGGCGG CGATGTGTTG ACGGTAAAAC CGGGTGCTGG CGATATTAAA 
ACCAAACAGA GCTTTTGTGA TGTGCAATTA CATATGGAAT GGCGCACACC TACCCAAGTT 
GAGGGTATGA AAGGACAGCA ACGTAATAAC AGTGGTGTGT TCTTTCAGCA GCGCTATGAA 
GTGCAAGTGT TAGACTCCTA TGAGAACCCT ACCTATTCAA ATGGACAGGC AGGCAGTGTT 
TACAAGCAAA CAATTCCGTT AGCAAACGCT ATGCGCCCAG CTGGTGAGTG GCAGTACTAT 
GACATCATCT ATACCGCGCC GCGTTTCAAG GGTAAAGAGT TGACTCAGCC TGGATACGTC 
ACTGTGATGC ATAATGGTGT CCTATTGCAA AATCATACCG AGATTCAAGG TAAAACAGAA 
TGGATTGGCG CCCCGAGCTA CGAAGCCCAC GGCTGTGCAC CTCTGCAGCT GCAAGATCAT 
GGTAATTTAG TGAGTTTTCG TAATATTTGG GTGCGTGAAC TGTAA 

 

Protein sequence

MKLTKRISNL TLILAGAISL SQHVNAEQSQ AEREAQAQKT EVWEPVPKIV STPVGRAPSD 
AVVLFNGDDL SAWEALKGGD APWSIGGDVL TVKPGAGDIK TKQSFCDVQL HMEWRTPTQV 
EGMKGQQRNN SGVFFQQRYE VQVLDSYENP TYSNGQAGSV YKQTIPLANA MRPAGEWQYY 
DIIYTAPRFK GKELTQPGYV TVMHNGVLLQ NHTEIQGKTE WIGAPSYEAH GCAPLQLQDH 
GNLVSFRNIW VREL