| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2682 |
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| Symbol | |
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| ID | 4174442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3266618 |
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| End bp | 3267838 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055700 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_662248 |
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| Protein GI | 109898993 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2017] Galactose mutarotase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.508916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAT TCACATTATT TACTTGTGCT TATTTTCGAT TTAACCGACT AGGGGGGTTG
CTTCGACTAT TTGTATTTAT TGGCTCGTGC AGTTTAATTT GTCTACCCGC GCTGTCAAAG
GCACAAGAAG ATGAGTCTGA CGTGGACGTG ACTGAGGAAA TTTGGGGCCA ATATAAAGGT
GAGGACATAA AGCGTTTCAC CTTATCTAAT CAACATGGCA TGCGGGTTAG CGTAACGAAT
TGGGGCGCCT ATGTAACATC CATTATTGTC GCGGATAAAA ACGGTACATT TGAAGATGTG
GTGTTGGGTT ACGACAGCGC AGATGAGTAT GTGCACGACT GTTGTTATAA CGGTGCAACC
GTCGGCCGTT TTGCCAATCG TATTGCTGGT GGGCACTTTC AAATCGATGG TAAACCAGTG
CAATTAAGCG TCAAGCGTGA TGGTGGTAAC AAAGGCAATC ATGCTCATGG CGGAGAATTG
GGGTTCAATA AGAAGCTGTG GCAGGCACGC CAAGTGCCCA GTGGAGTCGA GATGCGCTAT
TTATCCCTCG ACGGTGAAGA AGGGTATCCA GGCAATGCCA ATGTAACTGT GCTGTATCGC
TTAAATGCTA ATAATGAGTT TACCGTTAGT TTTCATGCTA CCAGTGACAA AACCACTCCT
ATTAATCTCA TCTCTCATAT CTATTTTAAT TTGACCGGCA ACCAAAAGCG CAACATTGAA
CAGCACCAAC TGCAGGTTGA CGCTAGCACT TTAGTGCAAG TCAAAAAGAG CTTACTACCC
ACTGGTAAGC TAATGAGCGT GAAAAGGACG CCGTTCGATT TAACAAAAGC AGCGACCCTG
CATGGACGAC TTACGAGTGT GCATGAACAA TTGAAATTGG CGAACGGACA AGATAAAACC
CATGGTGGCT TTGATCATAC TTGGGTGTTC GACCGATATG ATGGTAAGTT GCTCCATCAA
GTTCAACTAT ATGAGCCTGA CAGCGGGCGA ATGCTAGACA TTCTAACCAC TCAGCCAGGT
GTACACGTGT ACACAGGCAA CTTCATGAAC GGTAGTGCAA TAGGTAAGCA GGGAAAACCA
ATGACATTTC GCAGTGGCGT CGCACTAGAA ACGCAGCACT TTGCCGACTC GGTGAATCAA
CCTGAATTTC CCTCTACCTT ATTAAGGCCC GGTGAAACAT ACTCTGAATC AACCGTTTAT
CGCTTTGGGA GCAGACAGTA A
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| Protein sequence | MKPFTLFTCA YFRFNRLGGL LRLFVFIGSC SLICLPALSK AQEDESDVDV TEEIWGQYKG
EDIKRFTLSN QHGMRVSVTN WGAYVTSIIV ADKNGTFEDV VLGYDSADEY VHDCCYNGAT
VGRFANRIAG GHFQIDGKPV QLSVKRDGGN KGNHAHGGEL GFNKKLWQAR QVPSGVEMRY
LSLDGEEGYP GNANVTVLYR LNANNEFTVS FHATSDKTTP INLISHIYFN LTGNQKRNIE
QHQLQVDAST LVQVKKSLLP TGKLMSVKRT PFDLTKAATL HGRLTSVHEQ LKLANGQDKT
HGGFDHTWVF DRYDGKLLHQ VQLYEPDSGR MLDILTTQPG VHVYTGNFMN GSAIGKQGKP
MTFRSGVALE TQHFADSVNQ PEFPSTLLRP GETYSESTVY RFGSRQ
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