| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2675 |
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| Symbol | |
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| ID | 4174435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3258045 |
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| End bp | 3259631 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638055693 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_662241 |
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| Protein GI | 109898986 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit
[TIGR03324] alternate F1F0 ATPase, F1 subunit alpha |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCCA GCGTTGATAA CAACCTGAAA CAAGGTTACC AGTACCTTTT TGAGCACCTT
GAGCAGAGCC GTCAGCGAGC ACAGCCCAAC CTTGTGTTGC AAGAAATCGG GTCGGTGAAA
AGTGTTTCTG CTGGCATTGC CATCGTGCAT GGCTTACCCA GCGCAGGCTT TGAAGAATTA
TTGCGCTTTC CTGGGGATAT TTACGGCATT GCATTCAACA TTGATGAACA TGACATTGGC
GTCATCATGC TGGGGGATTA CAGTCAGCTT AACGCTGGGG ATGAAGTTAA GCGCACAGGA
CGTGTGGTAG ACATACCTGT TGGGGCTGAT TTAATAGGTC GAGTCATTGA TCCCCTTGGT
CGTACGCTTG ATGGTAAAGG CAACCTGACC AGCACGCAAC GCATGGCAAT AGAACGCCCA
GCCCCTGAGA TAATGACGCG CTCCCCAGTC ACTGAGCCGC TGCAAACCGG CCTCAAAGTA
TTAGACGCGC TCATACCGAT TGGTAAAGGC CAACGTGAGC TCATTATGGG TGACCGACAA
ACAGGTAAAA CATCGATCGC GATAGATGCC ATTCTCAATC AAAAAGACAA AAACGTGCTG
TGCGTCTATT GCGCCATAGG ACAAAAGTCA GCGTCGGTGG CCAAAATACT GGCCACCTTA
AAGCACCATA ATGCGTTTGA ATATACAGTG GTAATGGTCA CTGAGGGCAA TGATCCCCCC
GGGCTTGATT ACATCGCCCC CTATGCGGCA ACCAGTATTG GTGAATATTT CATGGAGCAA
GGCAGAGATG TGCTGATTGT GTATGATGAT TTAACTCAGC ACGCGCGCTC TTATCGAGAG
CTATCCTTGT TACTGCGCAG GCCTCCGGGC CGAGAAGCCT TCCCTGGGGA TATATTTTAT
CTGCACTCAC GCTTACTTGA GCGCTCAACG CACTTGAATG AGGCGCACGG AGGTGGGTCG
ATGACCGCAT TACCCATCAT TGAAACTGAA GAGCAAAATA TGTCGGCTTA CATACCGACC
AACCTGATTT CGATTACCGA TGGCCAGATA TATTTATCGC CCGATCTTTT TTCGCTTGGC
ATCTTACCAG CTGTCGATGT GGGCAAATCT GTGTCTCGGG TGGGTGGCAA AGCGCAGCGT
TCGGCATTTA GAAAAGTCTC TGGGGCATTA AAATTAGCAT ACGCACAGTT TGAAGAGCTT
GAAACCTTTG CCCGCTTCGG GGCGCGTCTA GATGCTAATA GCTTACAGAC AATCGAGCAC
GGACAGCGTA TTCGCTCATG TCTTAAGCAA GCTGAGTCAA GCCCACTGTC GGTGGCAGCT
CAAATTGTAA TATTACTGGC ACTGACAAAT GACCTGTTTG ATGCAATCGA TTTAGCGGCT
ATGGACAGCG CTCAATCCGC TGCCATTGAT GGCCTAACTA GCCTGCCCCT GCCTATTATT
GAAAAATTAG AACAGGCTGA AAGCATAGAA GAGCAAGATC AACACATCAT TCTCGACATG
TTATCCCAAG CACTTAAACC TTTTGCCCAA GGCACTTTGC GCAGTGGTGA TAAAATTCAG
CCTACGGTTA ATGAAGCCAA TGGGTGA
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| Protein sequence | MTPSVDNNLK QGYQYLFEHL EQSRQRAQPN LVLQEIGSVK SVSAGIAIVH GLPSAGFEEL
LRFPGDIYGI AFNIDEHDIG VIMLGDYSQL NAGDEVKRTG RVVDIPVGAD LIGRVIDPLG
RTLDGKGNLT STQRMAIERP APEIMTRSPV TEPLQTGLKV LDALIPIGKG QRELIMGDRQ
TGKTSIAIDA ILNQKDKNVL CVYCAIGQKS ASVAKILATL KHHNAFEYTV VMVTEGNDPP
GLDYIAPYAA TSIGEYFMEQ GRDVLIVYDD LTQHARSYRE LSLLLRRPPG REAFPGDIFY
LHSRLLERST HLNEAHGGGS MTALPIIETE EQNMSAYIPT NLISITDGQI YLSPDLFSLG
ILPAVDVGKS VSRVGGKAQR SAFRKVSGAL KLAYAQFEEL ETFARFGARL DANSLQTIEH
GQRIRSCLKQ AESSPLSVAA QIVILLALTN DLFDAIDLAA MDSAQSAAID GLTSLPLPII
EKLEQAESIE EQDQHIILDM LSQALKPFAQ GTLRSGDKIQ PTVNEANG
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