| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2656 |
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| Symbol | |
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| ID | 4174416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3221563 |
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| End bp | 3222444 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055675 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_662223 |
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| Protein GI | 109898968 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAATC CTGTTTGGTT AAAGACCTTT TGTACTCTTG CGGATATTGG GCACTTCACA
AAAACGGCAG AGACGTTATT TATGACGCAG TCAGGGGTAA GCCAACAAAT TAAAAAACTG
GAAGAACAAT TGGCCACTGC ACTGCTGATC CGCGAGGGCA AGTCATTTAC GTTAACGGAT
GCAGGCATGC GACTGCATGC GGATGGGCTT AAATTATTGC AAGCGGCGGT GCTACTTGAA
CAAAACGTGA AGCAAGACGA ACCCTTTGTT GGACAAGTGC GTATTGCCAC ACCTGGCAGT
GTGGGACTGA CCGTTTACCC TTTTTTATTA GATATTCAGG CTCTACATCC CGACCTGTAC
ATCAACCACG CTTTCTCACC GAATAAAAGC ATCGAGCGGG ATATAGGGCT ACGCCTATTT
GATTTGGGTG TGATGACACA ACCGAGCACC TCAGCTGACG TAATCACCGA AGCAATAGCC
CAAGAAGCAC TGGTTTTAGT CACCTCAAAT GAGATAGAAA CCCTCACTTG GCAGACACTG
CAGCGCTTAG GCTATATTGG CCATCCCGAC GGCCATCAAC ATTGCCAAGC ACTGTTACAA
GCCAATTTTA GCCAGTTCGA GCACCCGTCT CAATTTCAAG AGAAGGGCTT TTCAAACCAA
ATTAGTTTAA TACTCGAACC TGTCAGCCGC GGGTTTGGCT TCAGCGTGTT ACCCCTGCAT
GCTGCACGGG CTTTTCACGC TCAAGAACGT ATACGCATTC ACAACCTTAA AGCCCCCGTG
AACGAGACAT TGTACTTATG CCGTCATACT CATGTTGGGC AAAGTAAACG GGCGCGCTTT
ATCGCACAGC AAATAAAGTT ATTGCTTAAG CCTAAGCAAT AA
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| Protein sequence | MINPVWLKTF CTLADIGHFT KTAETLFMTQ SGVSQQIKKL EEQLATALLI REGKSFTLTD
AGMRLHADGL KLLQAAVLLE QNVKQDEPFV GQVRIATPGS VGLTVYPFLL DIQALHPDLY
INHAFSPNKS IERDIGLRLF DLGVMTQPST SADVITEAIA QEALVLVTSN EIETLTWQTL
QRLGYIGHPD GHQHCQALLQ ANFSQFEHPS QFQEKGFSNQ ISLILEPVSR GFGFSVLPLH
AARAFHAQER IRIHNLKAPV NETLYLCRHT HVGQSKRARF IAQQIKLLLK PKQ
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