Gene Patl_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2625 
Symbol 
ID4174385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp3189038 
End bp3189772 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content51% 
IMG OID638055646 
ProductNUDIX hydrolase 
Protein accessionYP_662194 
Protein GI109898939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAACA ACGAACCCTA TATCCCCCAC AATACGCCCT CCGCCGAGTT GCGATCCCAA 
GGACGCGCTG TAAAACCTAA AGATGCCGCC ACCCTGATTA TTGTGCGCCG GGACAGTACT 
CACCCCAAAA TTCTGATGGG TAAGCGCTCA GCTGAGCATA AATTCATGCC AAATAAGTTC 
GTGTTCCCTG GGGGTAAGGT TGACGCGGGC GACAGTCGTA TTCGCCCGCC TAACGACCTT 
CAACCCAGCG TACTGCAACG TTTAATGAAA GGATGCCCTG AGTCACGTGC TAGAGGGCTT 
GCACTGGCGG CTATTCGTGA AACGTTCGAG GAAACCGGAT TACTCCTTGG CGAAACCGAT 
AGCTTAACCA TAAAGACCCG CTCACCCCAG TGGCAGGCGT TTTTACAACA TGGTGTAAAT 
CCGCGCCTTG ATACCCTGAG TTTCATCGCC AGAGCCATCA CGCCGCCCTA TCGAAATCGC 
CGCTTCGATA CGCGATTCTT TATGGTAGAC GCAGATATTA TCCAAGGGGA TGTACACGAA 
ACGCCCCAAG GGTCTGGTGA ATTGCTCGCC ATGCACTGGG TATCACTGGT CGACGCCGAA 
AAGCTCGATT TACCTATTAT CACCCGAATG ATACTTAAAG AAGTAGCACA ACGCTTAACC 
AGCGGCCAAG CGCCTGAAGC CGAAGGTCCA TTTATATACT TTCGCAACGG CAAACCCGTG 
ATAGATAAAA TATAA
 
Protein sequence
MPNNEPYIPH NTPSAELRSQ GRAVKPKDAA TLIIVRRDST HPKILMGKRS AEHKFMPNKF 
VFPGGKVDAG DSRIRPPNDL QPSVLQRLMK GCPESRARGL ALAAIRETFE ETGLLLGETD 
SLTIKTRSPQ WQAFLQHGVN PRLDTLSFIA RAITPPYRNR RFDTRFFMVD ADIIQGDVHE 
TPQGSGELLA MHWVSLVDAE KLDLPIITRM ILKEVAQRLT SGQAPEAEGP FIYFRNGKPV 
IDKI