| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2599 |
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| Symbol | |
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| ID | 4174359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3157083 |
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| End bp | 3161396 |
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| Gene Length | 4314 bp |
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| Protein Length | 1437 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055620 |
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| Product | SNF2-related |
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| Protein accession | YP_662168 |
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| Protein GI | 109898913 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTG CTGCTTTAAT TCATCCCCAA TCACATCATC AAATCGAAGC GTTATATCAG
AAATTTTTAA CGCTGAGTGA AGCTGAGCAA GCGACGCTAT TCATTTTATC CGTCATTCAT
AAGCCCATTG GGGCGCTGAA ATTAGCCTTG GTCATTGATT TACTCATTGG TCGAGGCTTA
CTGGCGTTAC CCAAAAAACA ATACGCACTT ACCTCTGAGA AAAAAGAACA ACTCACCTCT
GAATCGTTGT TAATAAACAA CCGAGAAGGC TTGCAACTTA ATCCACTGTT AGGCAATTTT
TTAGTGAAAA AAATCGACCA ATTGCCTGTC GCCGCAGACC TTGAACCAGG GCAAAGATTA
CTCGAAATCA TCATGACTGG CGAGCAAGTG GTGCCAGTCA TAAACAGTTA TAGTTGGCAG
AACAAAGAAG CTGATAGGGC TAGGGTGATC CGAGATTTGT ATTATTTGCA TCAAATGGGT
GACTTTGAAG CCGCGTTAGA TTTTCATAAG AACCCCCAAA TTATTGAGCA CACAAAGAAC
AAGGTATTGC TCGAGGTTCT TTTCTTACCC TTTGATTTAA AGTCTTTTTT ACAGCTTTCC
AGCGCTGTTC AATACCAAGC ATTCGCGACG CTTCTTAGAA CGTTCCAAAT AGAAGGGCAA
AGCTGTGCGT ACCCCATTCA ATTATTAGAG CAAGTTTGCG CAGCTGCACC AGATACCACA
GAGCCGAGTT ACAATAGCGA CTGTCATCAT CTATTGGCGG AGCAGTATTT ATATCAGCTG
CGCTTTGATG ACTTTTTACG TATTCAAAAT CCACAAGACA AAAGCAGCTA TGGGTTGCAG
CTGCGAGGCA CTTATTGTTT TTTAACAGGG CAGAATGAGC TTGCTATTGG TTATTTCGAA
CAAGCCATGC TGGCAAAAAA CAAGTTAACG AAGCGCAAAA AACAATACTT GAATGAGCTG
CCAGGTTACT TCTATAAATT GGCGTTAATG GTAAAGGCGA ATCAAGATGA TGTGAGTGCG
TTTAGCAGTG CACTGCAACA AGTGGAATAT GAAGAAAGCG ATCGTAAAGT TAACAGCGAC
TTTTATTATA TAGGCCAAGG CGTTGTTAAG CCCATTATGT GCCTTTCTGC GGGGCTAAAA
TACGATATCA ATATTGGTTA CAACAGCATT GACGATGAAT TAGACTTCTT CGCCCATCAG
CTGTGTTACT TCAATTATTT CTTAGGGCAG GTTTGGTGTA ATCAAAGCCA AGATCCAGCA
TTGGCAACGT TAGCGTTGAA ATATCGAGGG CATTTTATGC AACTTGATTA CCCGCTTTTC
GCGCAAATAT GCGCGCAATT TGCCACCAGC TTCAATCACG AGAAAGCTGA GACCGCGCCA
TCTTCGACGC TCGCACCCTC GGCAGAACTA GCAGGAAATC TAGTGGATTT TACCCGTTTG
ATCGTGACTA AATCACAGTG GGATTTAGCC CTTGATAAAC TGATTGCCCT TAACCCAAAT
GCACCTAAAA ATGACACACC CGCTAAAGAG GTGGTCATCA AGCCTGTGCG CTTAATTTGG
GAATTTGAAC AGACCTATGC CCACAGTTTA ACGGCGCGAG AGCAGAAGTT GAATAAGTCA
GGCTGGAGCA AAGGGCGAGT AGTCTCGCTA AAACGCCTCA AAGAAGAACC CCATAAATTT
GACTATTTAA CCGAAAGTGA CAAAAAGCTT TGCCATGCCA TTGATGCATA TCAAAGTTGG
GGCTACTACT CAAAAGTTGA CTATATGCTG CAAGGGTTAC CTGCGCTGCA AGCCGCCGTT
GGCATAGACA ACTTATACAA AGCGGACGAT GTAAACCAAA AGATTGACAT CACCCAACGC
GAACCAGAAT TATTGGTTAG CGCGTTAGGC GAACAACTCT GTTTGAGCAT TGCTGATTTA
CCCGATGACA TTCGCGAAGA CGACGATCAG CCCGCCTACA ATCTAAAGGC GGTTTCGGAT
AATCAATATC AGCTGACCGT GTTCTCAACA TCGCATCTAA AAGTGGCCGA CATCATTGGC
GAATCCGGTT TGCTTATACC CATTAGCGCC AAACAAAAAG TCCTTGAAGG GATTTCTGCG
ATTGCTCCTT TTTTGAATAT TCAATCTGAT ATTGCTGAGC TGGACACCGG ATTAGAAGCC
TTTGAGTGCG ATCCTAATTT GGTGGTCAAT ATTCAGCCAA ATCAAAACGG CTTGACCTTT
ACCTGCGTCG TAATGCCATT TGGAGAGAAT GGACCGGCGT TTAAACCTGG TGTGGGCAAT
GCCAGTTTGA CCACTGATTT AGACGGCAAA CGCATGGCGA CACAACGTGA TTTGCAGCGA
GAAGAAACCT TACTCGATGA GCTAGACCAA GCCTGCCCAG TGTTTTTGGA TATGCCGGAC
AACGTTCTTC TGTTAGATGA TTTGCAAGCG GCCCTGAGTG CACTTGAACA GTTGGAAATA
GCCCACAAGC GAGACACCTT TGATTTAGTG CTGCGCTGGC CGAAAGGTAA AAAAGTGACC
TTGTCGAAAA CCCTAGACAG TGAGCAACTG CAGCTGGCGG TCAGTCAAAA GAACGAATGG
TTTGATATTA CCGGTGACGT ACAAATAGAC AATGAACAGG TCATTGAATT AAGAAAGCTG
CTTGAACTGG TTAAAACCAG CCATGGGCGA TTTATCGAGC TTGGTGAGGA ACAAATACTC
GCCTTGTCTG ACGATTTGCG GCATAAACTT GAGTTAATGA ATCAAGTTAC TGATGACGGA
AAATTTCACC CATTAGCCAG TTTGCAAATG GAAGAAGCCA CCACAGGTAT GCGCATGAAA
ACCATTCATG CGTGGGAGCA GCAAACCGAA AAAATGCACC AAGCGAGCGA GATTTCGCCG
CTGATCCCCT CGACCTTTCA AGCGCAATTA CGTGATTATC AACTGGTTGG CTTTGATTGG
GCGTCACGCC TTGCTCATTG GGGGGCAGGG GCATGCTTAG CTGATGACAT GGGTCTAGGG
AAAACCTTAC AAGCTTTGGC CATTTTATTG TCCCGAGCCA GTGATGGGCC AAGCTTGGTG
ATTGCCCCCA CATCTGTGTG TTTTAACTGG CAACAAGAGG CGCTTAAATT TGCCCCAACC
TTGAATATAA AGTTATTCGC TGACTCGACT AACACGCTAC AACGCGAAAT GCTGTTGAAC
GATTTAGGTC CGTTCGACTG CGTGATCATC AGTTATGGAT TACTGCAAAG AGAAAGCGAA
ATACTCAAAG GTGTGCATTG GCACAGCATA GTGGCAGATG AAGCCCAAGC CTTGAAAAAC
CCGCTGGCTA AGCGCACAAA AGCGGCTTGT GCACTGAAAA GTGATTTTAA GATGATCACA
ACAGGCACGC CGATTGAAAA CAACTTGACC GAACTGTGGA GCCTATTTCG TTTTATCAAC
CCAGGCTTGC TTGGTAACAT TAAGCGCTTT GGTCAGCGCT TTTCAGTGCC GATCGAAAAT
GCCCATGAAG ACCCTTTGGC AGCGCGTAAG GCCAGTCAAG CCCTTAAAGT ACTGATACAG
CCGTTTATAT TACGGCGCAT GAAGAACCAA GTGTTAACGG AGTTGCCATC GCGCACTGAG
ATTAATATTC GTGTTGAAAT GAGCGCTCAG GAGCGCGATT TTTATGAAGC GCTTAGACTC
AATGCCATCG ACAATATTAG TCAAAGCGGT CAACAAGCTA ACGCAGGTGA GCAGCGCATT
AGAATGCTCG CAGAGCTCGT AAAATTACGC CAGGCCTGCT GCAACCCCAA ATTGGTCATG
GCGGAAACGA CAATACCCAG TGCCAAACTC GCAGCTCTTG ATGAGTTATT AGAAGAGCTC
AAGCTGAATA ATCATAAAGC GCTTATTTTT AGCCAGTTTG TTGGGCATTT ACAATTGATC
AAGCAGCACA TTGAAGCCAA AGGATTTAGT TACCAATACT TAGATGGCTC GACACCGCAA
AAGCAGCGAC AAGCTAGCGT TAATGCTTTT CAGCGCGGGG AGGGGGATAT CTTCTTGATT
AGCTTAAAAG CGGGTGGCTC AGGCTTAAAC TTAACCGCTG CGGATTACGT TATACACATG
GACCCATGGT GGAACCCAGC AGTAGAAGAA CAAGCTTCGG ACCGTGCTCA TCGAATAGGG
CAACTGCGCC CAGTCACTAT CTACCGCTTA GTTACTCGGA ACACCATAGA GGAGAAAATC
GTCTCCCTGC ATCAGCATAA ACGCGACTTA GCGGATACCT TATTAGAAGG AAATGAAGCC
GCGACTAAGC TGTCGGTGGA TGACATGTTA AACCTGCTCA AAGAAACCTT TTAA
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| Protein sequence | MKLAALIHPQ SHHQIEALYQ KFLTLSEAEQ ATLFILSVIH KPIGALKLAL VIDLLIGRGL
LALPKKQYAL TSEKKEQLTS ESLLINNREG LQLNPLLGNF LVKKIDQLPV AADLEPGQRL
LEIIMTGEQV VPVINSYSWQ NKEADRARVI RDLYYLHQMG DFEAALDFHK NPQIIEHTKN
KVLLEVLFLP FDLKSFLQLS SAVQYQAFAT LLRTFQIEGQ SCAYPIQLLE QVCAAAPDTT
EPSYNSDCHH LLAEQYLYQL RFDDFLRIQN PQDKSSYGLQ LRGTYCFLTG QNELAIGYFE
QAMLAKNKLT KRKKQYLNEL PGYFYKLALM VKANQDDVSA FSSALQQVEY EESDRKVNSD
FYYIGQGVVK PIMCLSAGLK YDINIGYNSI DDELDFFAHQ LCYFNYFLGQ VWCNQSQDPA
LATLALKYRG HFMQLDYPLF AQICAQFATS FNHEKAETAP SSTLAPSAEL AGNLVDFTRL
IVTKSQWDLA LDKLIALNPN APKNDTPAKE VVIKPVRLIW EFEQTYAHSL TAREQKLNKS
GWSKGRVVSL KRLKEEPHKF DYLTESDKKL CHAIDAYQSW GYYSKVDYML QGLPALQAAV
GIDNLYKADD VNQKIDITQR EPELLVSALG EQLCLSIADL PDDIREDDDQ PAYNLKAVSD
NQYQLTVFST SHLKVADIIG ESGLLIPISA KQKVLEGISA IAPFLNIQSD IAELDTGLEA
FECDPNLVVN IQPNQNGLTF TCVVMPFGEN GPAFKPGVGN ASLTTDLDGK RMATQRDLQR
EETLLDELDQ ACPVFLDMPD NVLLLDDLQA ALSALEQLEI AHKRDTFDLV LRWPKGKKVT
LSKTLDSEQL QLAVSQKNEW FDITGDVQID NEQVIELRKL LELVKTSHGR FIELGEEQIL
ALSDDLRHKL ELMNQVTDDG KFHPLASLQM EEATTGMRMK TIHAWEQQTE KMHQASEISP
LIPSTFQAQL RDYQLVGFDW ASRLAHWGAG ACLADDMGLG KTLQALAILL SRASDGPSLV
IAPTSVCFNW QQEALKFAPT LNIKLFADST NTLQREMLLN DLGPFDCVII SYGLLQRESE
ILKGVHWHSI VADEAQALKN PLAKRTKAAC ALKSDFKMIT TGTPIENNLT ELWSLFRFIN
PGLLGNIKRF GQRFSVPIEN AHEDPLAARK ASQALKVLIQ PFILRRMKNQ VLTELPSRTE
INIRVEMSAQ ERDFYEALRL NAIDNISQSG QQANAGEQRI RMLAELVKLR QACCNPKLVM
AETTIPSAKL AALDELLEEL KLNNHKALIF SQFVGHLQLI KQHIEAKGFS YQYLDGSTPQ
KQRQASVNAF QRGEGDIFLI SLKAGGSGLN LTAADYVIHM DPWWNPAVEE QASDRAHRIG
QLRPVTIYRL VTRNTIEEKI VSLHQHKRDL ADTLLEGNEA ATKLSVDDML NLLKETF
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