| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2588 |
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| Symbol | |
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| ID | 4174348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3140539 |
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| End bp | 3142014 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055609 |
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| Product | betaine aldehyde dehydrogenase |
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| Protein accession | YP_662157 |
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| Protein GI | 109898902 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCCTA ACGTGACAAC ACCTGTTTAC CAAAATTTCA TTCATGGCCA ATTCCTCGCT
AACCAATCTG GCGAAACATT TGCTGTTAAA AACCCAGCAA CTGACGACGT GATTTATCGC
GTTGAAGTAG CAGATGATTC CGTTCAACAG GCGGCAATCA ACAGTGCTAA AGAAGGCTTT
GCACTTTGGT CAGCTATGAC GCCCATTGAA CGTAGTCGGA TTTTATTGAA AGCTGTGTCA
TTACTGCGTG AGCGTAATGA CGCCTTAGCA AAAATTGAAG TGCTAGATAC CGGCAAACCG
TGGCAAGAGG CCGAGTGCGT GGACGTACAA ACGGGTGCTG ATGTTATCGA ATACTTTGCT
GGGTTAGCCC CAGCTCAAGT TGGTCAGCAA CAATCGATAG GTGATGATTT TTATTACACC
CGCAAAGAGC CACTTGGCAT TTGTGCTGGC ATAGGCGCAT GGAACTACCC ACTGCAGATC
GCCTGTTGGA AGTCGGGCCC AGCGCTTGCT GCGGGTAATG CACTTATTTT CAAACCGTCT
GAGGAAACCC CATTAGGCGC GATTAAATTA GCAGAGATTT TCTTCGAAGC GGGTCTACCA
GCCGGTGTGT TCAATGTGGT GCAAGGCGCT GCAGAAGTAG GCCAATGGCT GACCCAAAGC
CCAGACATCG AGAAGGTGTC TTTCACCGGT GAAGTAGGCA CAGGCAAAAA AGTCGTTGCC
AGTGCAGCTG GCTCACTAAA AGATGTGACC ATGGAATTAG GCGGTAAATC CCCGTTACTC
GTGTTTGAAG ATGCCGATGT GTCACAAGCG GTGAGCGCCG CAATGCTTGG TAACTTCTAC
ACCCAAGGTG AAGTGTGTAC CAATTGTACC CGGGTTTATG TCCACAAGTC TGTGTATCAG
GCATTTATAG ACGAGCTTAA AACCCGCACT GAGCAGAACA TTATTGCTGG TGACCCGCTT
GATCCAAACG TTAATTTGGG CGCGTTGATT TCTAAAAATC ACCAAGACTT AGTCATGAGC
TATATCAACA AGGGCATTGA AGAGGGCGCG ACCGTATTAA CGGGCGGAAC AACGCTTAGC
CCTGCATCAG CACCGAACGG TTATTTTGTG GCACCGACGG TGTTCACCGA TTGCACCGAC
GATATGACCA TAGTCAAAGA AGAAATATTT GGCCCAGTGA TGAGTGTGTT GGTGTTTGAT
GATGAAGCTG ATGTGATACG CCGTGCGAAC GATACGCACT TAGGTTTGGC CGCGGGGGTA
TTCACTAAAG ACATCAAGCG CGCTCACCGC GTTATTCACA AATTACAAGC GGGCATTTGC
TGGATCAACA GCTACGGTAA TTCCCCGGCA GAAATGCCAG TGGGTGGTTA TAAGCAATCG
GGGATCGGCC GTGAGAACGG CATCGAAACA CTCGATCATT ACACCCAAAC TAAATCTGTT
TATGTGGGTA TGACCGACAT AGAGAGCCCA TTTTAA
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| Protein sequence | MDPNVTTPVY QNFIHGQFLA NQSGETFAVK NPATDDVIYR VEVADDSVQQ AAINSAKEGF
ALWSAMTPIE RSRILLKAVS LLRERNDALA KIEVLDTGKP WQEAECVDVQ TGADVIEYFA
GLAPAQVGQQ QSIGDDFYYT RKEPLGICAG IGAWNYPLQI ACWKSGPALA AGNALIFKPS
EETPLGAIKL AEIFFEAGLP AGVFNVVQGA AEVGQWLTQS PDIEKVSFTG EVGTGKKVVA
SAAGSLKDVT MELGGKSPLL VFEDADVSQA VSAAMLGNFY TQGEVCTNCT RVYVHKSVYQ
AFIDELKTRT EQNIIAGDPL DPNVNLGALI SKNHQDLVMS YINKGIEEGA TVLTGGTTLS
PASAPNGYFV APTVFTDCTD DMTIVKEEIF GPVMSVLVFD DEADVIRRAN DTHLGLAAGV
FTKDIKRAHR VIHKLQAGIC WINSYGNSPA EMPVGGYKQS GIGRENGIET LDHYTQTKSV
YVGMTDIESP F
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