| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2553 |
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| Symbol | |
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| ID | 4174308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3096143 |
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| End bp | 3097606 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055570 |
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| Product | betaine-aldehyde dehydrogenase |
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| Protein accession | YP_662123 |
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| Protein GI | 109898868 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.153843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGTTC AAGATTTACA CTTTAAAAAC AAGGTTAATT TCATTGGAGG GCAATATGTG
CCCTCTAACG AATCCGATAC AATTGACATA CTTAGCCCGT CAACTGGCAA AGTCATAGGC
GAAATACCGG CAGGTTGTAA AGCGGATGCT GAAAATGCCC TAGAGGTGGC TCAGGCCGCG
CAAAAAGCAT GGGCTAAATT AACCGCTCGT ACACGCCAGA ATATGCTGCG TACCTTCGCT
AACAAAATTC GTGAGAATAA ACACATTCTT GCCCCTATGC TCGTCGCTGA GCAAGGCAAA
TTGTTATCAG TAGCCGAAAT GGAAGTGGAC GTAACCGCTA CGTTTATCGA CTACGGATGT
GACAATGCCC TGACCATAGA AGGCGACATT TTGCCTTCAG ATAATCAGGA CGAAAAAATA
TACATTCATA AGGTACCAAG AGGCGTGGTT GTGGGCATTA CCGCCTGGAA TTTCCCTCTG
GCATTAGCAG GTCGAAAAAT TGGCCCTGCG CTTATTACCG GTAATACCAT GGTGTTAAAG
CCTACCCAAG AAACGCCGCT TGCAACGACT GAGCTTGGGC GTATTGCCAA AGAAGCAGGC
CTTCCCGATG GCGTATTAAA CGTCATAAAT GGTACTGGCT CTGTGGTCGG GCAAACCTTA
TGTGAAAGCC CCATCACTAA AATGATCACC ATGACAGGCT CCACTGTCGC GGGTAAACAA
ATTTATAAAA CCAGCGCAGA GTATATGACC CCTGTCATGC TTGAGTTAGG TGGTAAAGCG
CCGATGGTCG TCATGGATGA TGCCGATCTT GATAAGGCGG CAGAAGATGC ACTGTGGGGG
CGTTTTGCCA ACTGCGGACA GGTATGCACT TGTGTAGAAC GCTTATATGT TCATGCAAGT
GTTTACGATG AGTTTATGGC TAAATTCTTA CCTTTAGTGA AAGGGTTGAA AGTCGGGGAT
CCCATGGATG CAGACTCACA AATGGGCCCT AAGTGTAACC AGCGTGAAAT TGATAATATC
GACCACATAG TGCATGAAGC CATCAAGCAA GGTGCAACGG TTGCCACTGG CGGTAAGACG
GCAACAGTTG AAGGCTTCGA AGGCGGCTGT TGGTATGAGC CCACCGTTTT AGTGGATGTT
AAACAAGACA ATATAGTGGT GCACGAAGAA ACCTTCGGCC CCATTCTACC TATCGTTAAA
GTCAGTAGTA TGGAACAAGC TATCGAGTTT TGTAACGACA GCATCTATGG TTTAAGCGCT
TACGTACACA CCCAAAGCTT TGCCAATATT AATCAAGCTA TCAGTGATTT AGAAGTCGGT
GAAGTGTATA TCAACCGCGG AATGGGTGAG CAGCATCAGG GCTTCCACAA CGGCTGGAAA
CAAAGCGGTT TTGGCGGTGA AGACGGTAAG TTTGGCCTTG AGCAATACTT GGAAAAGAAA
ACCGTTTATA TCAATGAGGC TTAG
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| Protein sequence | MTVQDLHFKN KVNFIGGQYV PSNESDTIDI LSPSTGKVIG EIPAGCKADA ENALEVAQAA
QKAWAKLTAR TRQNMLRTFA NKIRENKHIL APMLVAEQGK LLSVAEMEVD VTATFIDYGC
DNALTIEGDI LPSDNQDEKI YIHKVPRGVV VGITAWNFPL ALAGRKIGPA LITGNTMVLK
PTQETPLATT ELGRIAKEAG LPDGVLNVIN GTGSVVGQTL CESPITKMIT MTGSTVAGKQ
IYKTSAEYMT PVMLELGGKA PMVVMDDADL DKAAEDALWG RFANCGQVCT CVERLYVHAS
VYDEFMAKFL PLVKGLKVGD PMDADSQMGP KCNQREIDNI DHIVHEAIKQ GATVATGGKT
ATVEGFEGGC WYEPTVLVDV KQDNIVVHEE TFGPILPIVK VSSMEQAIEF CNDSIYGLSA
YVHTQSFANI NQAISDLEVG EVYINRGMGE QHQGFHNGWK QSGFGGEDGK FGLEQYLEKK
TVYINEA
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