Gene Patl_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2545 
Symbol 
ID4174300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3086533 
End bp3087249 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content44% 
IMG OID638055562 
ProductSapC 
Protein accessionYP_662115 
Protein GI109898860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCAGC CAGTACTAAT CGATTTTAAA CAGCATAGTA AAACCCTAAT AAAAACGCAG 
AGGGGCGCCG AGTTCGGCGA GAATGTACAC TTTATTCCAG TGATAGCCGA TGAGGTGAGG 
GCACTTGCCC TTGCGTATCC TATTTGTTTT TTGAAAGACA ATAACACGGG GCAGTTTGGT 
CTAAATGTGT TGACGGGATT CGAAGCGGGT GAAAACTTAT TTTTGCAAAA TAATGAATGG 
CGCACGCATT ATGTACCTAT TCATTTGAGA CGCCAGCCAT TTTTGGTGGG GGTGACAGAA 
AACGGCGCCA AGCCAACTAG CGAGAATACC GTACTCACAG TGGATATGGA TAGCCCTAGG 
GTAAACACTG AGCAAGGTGA GCGTTTATTT GATGAGCAAG GTAATGCCAG TGCTTATCTG 
ACCCAAATGG TTGATTTGTT GGGTCAACTG ATGTCAGGAA ACAACCGTAC TGAGGTCTTT 
ATCAATGCGT TGCTCGAGCT GGACTTAATC GAAGAGTTGC AACTGAATAT TACCCTAAAA 
GATGGCCAGC AAAAGCGCTT TGACGGCCTG TATAATATTA ATGAAGCGAA ACTCGCTGAA 
TTAAAGGGGC AAACTCTAGA AGACTTCAAA ATGAAGGGCT ATTTACAAGC GTGTTATTTA 
ATTGCTGCAT CTACTGGGCA TATTCAGACC TTGCTGGACT GGAAAAAACA AGCCTAG
 
Protein sequence
MAQPVLIDFK QHSKTLIKTQ RGAEFGENVH FIPVIADEVR ALALAYPICF LKDNNTGQFG 
LNVLTGFEAG ENLFLQNNEW RTHYVPIHLR RQPFLVGVTE NGAKPTSENT VLTVDMDSPR 
VNTEQGERLF DEQGNASAYL TQMVDLLGQL MSGNNRTEVF INALLELDLI EELQLNITLK 
DGQQKRFDGL YNINEAKLAE LKGQTLEDFK MKGYLQACYL IAASTGHIQT LLDWKKQA