| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2540 |
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| Symbol | |
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| ID | 4174295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3080657 |
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| End bp | 3081454 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638055557 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_662110 |
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| Protein GI | 109898855 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTATTG GCTTAAACCC CATGCTGGGT GATAATGACG ATTCATTATC TGTTTTATCT
GGTTTAGACA TGCGTTTTTT TATCTTAGTT TTCCTTTTAA TCTTTGGATT ATTTCCCGCG
ATTTCCTATG GGCAATATGT CATTCAAAGC TCGGTGTCTA AGGAGTTCAT CAACGGGTTA
CAAGTCAAAT ATCTTAAAAA TATTGCTAAA CATATGAACA TGGAAATTGA AATCATTCCC
ATGCCTTTTG CCAGAAGAAT AAGAGAATTA CGGGAAGGAA ATTTAGATCT GTTAGTTGGG
TTACGGCGTG TGGATGGTGA GCAAGACGAA GTCGTTTATA TCAAACCAAG TTATGAAACC
CTGAGACACA CTTTTTTTGT TCGCAAAAGT GATGAAAACC AGCTACTGAG TTTTACCGAT
TTGAGAAAGC TGAATATTGG CGTGACTCGA AATGCAAAAT ATTTTGAGAG ATTTAACCAA
GAAACAGACT TGGTAATGGT TCCCGTATCG ACGCTTTTGC AAAAGATAGA ACTGTTAAAG
AAAGGCAGAA TTGATACCTT TATCCACTTT CAAGAAAGTG CGTTACCACG GATCAATGAT
ATGGGCCTAC AAAATGATAT TGTTTTAGCC CAGTATCAAC CCATTGAAGT GAATAATTAT
TATGTAACCA TCAGCCAAAA TTCGCCGTTA TTTAAGCATA AACACTTGGT TGAAGCCGCC
GTGCGAAAAG CGATTAAGGA TGATGAATTT GCTACCATTC GCCGAGAACA TTACTTATCT
CAAGCTCGCC AAAATTAA
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| Protein sequence | MAIGLNPMLG DNDDSLSVLS GLDMRFFILV FLLIFGLFPA ISYGQYVIQS SVSKEFINGL
QVKYLKNIAK HMNMEIEIIP MPFARRIREL REGNLDLLVG LRRVDGEQDE VVYIKPSYET
LRHTFFVRKS DENQLLSFTD LRKLNIGVTR NAKYFERFNQ ETDLVMVPVS TLLQKIELLK
KGRIDTFIHF QESALPRIND MGLQNDIVLA QYQPIEVNNY YVTISQNSPL FKHKHLVEAA
VRKAIKDDEF ATIRREHYLS QARQN
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