Gene Patl_2491 details

Gene Information

• Locus tag: Patl_2491
• ID: 4174245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 3022236
• End bp: 3022907
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638055507
• Product: hypothetical protein
• Protein accession: YP_662061
• Protein GI: 109898806

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000306277
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCCTTT TATGCATAAT AGGATCCGTG GCTCAAGCTA CTGCTCTACC CACATTTGAT 
GCCGAGTACA CCGCATTTCG TTACGGTAAA AAGTTAGGTT ATGCCTTGCT CAGCGTTGAA 
AATGTAGATG ATGAAACCTA TCGCATGGAA TATCACTCGA AGGTTTCCTT GTTCTTCTTA 
TCTGATAAGC GTACTGAAAT AAGTGATTTT GCTTTTATTG ACGATAAAAT AGTGCCGAAA 
AATTATCGGT ATAGTCGTAC AGGCACTGGC AGCAATAAAA GTATCAAAGT TGTTTTCGAT 
GCAGGCAAAG AAAAGATATT CATCGATAAA GAGCCTGGAA TTGACTGGCA AGATCAGTTT 
GACAACCAGC TTTATCGGTT GGATTTGCAA CAGAAGCTTG CTCAAGGTCA GAAGGAGTTT 
AGTTACCAAG TAATTAACTA TCGCGGTCAA GAGCGGGATT ACCATTTAAA AGTCATGGGG 
ACTGAGCAGC TAACGTTGCC TTACGGTATG CTCGAAGGTA TAAAAGTTGA AATTGTTCGT 
CATAACTCAA CACGAGAGAC CTTCGCATGG TTTTCACCAC AGCTGAATTA CCAGCTCGTA 
CGCTTGCAAC AGTTCAAAGA CGATAAAGAA CAAGGTGACA TTCAATTAAA GACCTTTACC 
GCCACTCAAT AG 

 

Protein sequence

MGLLCIIGSV AQATALPTFD AEYTAFRYGK KLGYALLSVE NVDDETYRME YHSKVSLFFL 
SDKRTEISDF AFIDDKIVPK NYRYSRTGTG SNKSIKVVFD AGKEKIFIDK EPGIDWQDQF 
DNQLYRLDLQ QKLAQGQKEF SYQVINYRGQ ERDYHLKVMG TEQLTLPYGM LEGIKVEIVR 
HNSTRETFAW FSPQLNYQLV RLQQFKDDKE QGDIQLKTFT ATQ