Gene Patl_2439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2439 
Symbol 
ID4174188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2965991 
End bp2966416 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content46% 
IMG OID638055450 
Producthypothetical protein 
Protein accessionYP_662009 
Protein GI109898754 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TACTGTTGGT TATCTCTGGG GCGCTGCTAA TCAGTGCTTG CACGAGCGTG 
CCGAACAAGA GTGCCTTGAC CCCATTGGAT TTAACGGCCG ATAAAGCTGC AGTAGATGAA
TATTGGCTTG CTTATCGTAA AGTCACGCCT GTGTATCCAA CGCTGGCAAA ACAACAGAAA
TTATCAGGTT GCGTTGAGTT TTCTTTGCTT ATTGATGCAA ATGGCCGGGC GGTCGCGCCT
GCCATCATTA AATCTTTCCC GAAAGGGGTG TTTGAAAAGC AGGCAACGAT TGCCATTGAA
AAATGGGTAT GGGTACCAAC TCAGACTAAT ACCAAGCGCC AGCCCGTCAT GCTCACCTTT
CAACATGATT TCGTTGTTAG GCAATCCTCG AATAGCAAAG CGGCTTACGA TGCGTGTAAA
ATCTAA
 
Protein sequence
MNKLLLVISG ALLISACTSV PNKSALTPLD LTADKAAVDE YWLAYRKVTP VYPTLAKQQK 
LSGCVEFSLL IDANGRAVAP AIIKSFPKGV FEKQATIAIE KWVWVPTQTN TKRQPVMLTF
QHDFVVRQSS NSKAAYDACK I