| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2416 |
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| Symbol | |
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| ID | 4174165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2938361 |
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| End bp | 2939350 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055427 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_661986 |
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| Protein GI | 109898731 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.941924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAG CACAAACGGC ATCGCTTATA TTAACACCGG TGAAAAGCGT CAATATCAGC
TTGGTTTCAT CCTGGCTAAG AAATGCAGCA TTGCCACTAC TGGGGATCTT AATATTTCTC
GGCTTGTGGG CTGTGCTTGC CAAAAACATT GATACATCAC TGGGGAAGTT CCCAGGTCCA
AGCGATGTGT TAACTCAGGC TCAAGTATTG ATTGAAGAGC ATGGGGAACA GCGAAGTAAA
GCCAACGCAT TTTATGAGCG CCAAGAGCAG CGCAATGCCG CACGGGTCGC CAAAGATCCC
AGCTACAGTC CGACTATTCG CGCATTTACC GGTGCTCCGA CTTTCTTTGA TCAAATATGG
ACCAGTCTAT ACACAGTCAC GGTTGGCTTC TTGATCGCCT CGGTTATAGC GGTACCACTG
GGGATATTAT GCGGCTTAAG TAAAGCCTCT TATGCGGCCA TTAACCCGTT GATCCAACTG
CTCAAACCTG TGTCACCTTT AGCGTGGTTA CCATTGGTCA CTATGGTGGT TAGTGCGGTG
TATATAAGCG ATGACCCGAT GTTTTCGAAA TCGTTTATTA CATCAGCGGT CACTGTGTCT
TTGTGCTGCT TGTGGCCCAC TTTAATCAAT ACCGCTGTTG GGGTATCGAG TATTGACAGT
GATTTGATCA ACGTGAGCAA GGTGCTCCGA TTGGGACCTT TTTCACATGT GATGAAGATT
GTGATGCCAT CATCAATTCC AATGATTTTT ACCGGTTTGC GCTTGTCGTT AGGCATAGGT
TGGATGGTGC TTATCGCTGC AGAAATGCTC GCGCAAAACC CAGGGTTAGG CAAATTCGTA
TGGGACGAGT TTCAAAATGG TAGCTCAGAG TCATTGGCTA GGATCATGGT AGCGGTATTA
ACGATCGGCT TAATTGGTTT TGCGTTAGAC AGACTAATGT TGCTGCTGCA GAAACAAGTG
AGCTGGGACA AAGGGGCGGT GCTGCGTTAA
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| Protein sequence | MSKAQTASLI LTPVKSVNIS LVSSWLRNAA LPLLGILIFL GLWAVLAKNI DTSLGKFPGP
SDVLTQAQVL IEEHGEQRSK ANAFYERQEQ RNAARVAKDP SYSPTIRAFT GAPTFFDQIW
TSLYTVTVGF LIASVIAVPL GILCGLSKAS YAAINPLIQL LKPVSPLAWL PLVTMVVSAV
YISDDPMFSK SFITSAVTVS LCCLWPTLIN TAVGVSSIDS DLINVSKVLR LGPFSHVMKI
VMPSSIPMIF TGLRLSLGIG WMVLIAAEML AQNPGLGKFV WDEFQNGSSE SLARIMVAVL
TIGLIGFALD RLMLLLQKQV SWDKGAVLR
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