| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2359 |
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| Symbol | |
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| ID | 4172513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2872745 |
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| End bp | 2874094 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055367 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_661929 |
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| Protein GI | 109898674 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0747418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAT CCCTCCCCTC CAACCCCGAA AAATTCAGTT TAACAGCCAG AATATTTTTC
GGCATGCTGG CCGGTATCGT TATCGGTGGC CTTCTCCAGC AACTGTTTGA TGATAGCGGA
GATTTTTCGT TTAGTGTATT TGGGTTAGAG GTTTCTACGT ATGGACTTTT AGTCGATGGT
ATATTTAATG TTGTCGGGCA AATTTTTATC GCCAGCCTCA AAATGCTTGT CGTGCCCTTG
GTGTTTGTTT CATTGGTTTG CGGTACCGCA AGTTTGTCGG ATCCCAGTAA ACTAGGGCGT
TTAGGCGGCA AGTCTATTCT GCTTTATATC GGCACAACCG CCATTGCCAT TTCTCTAGCG
GTTGGTTTTG CACTTTTGGT CTCCCCAGGT GAATCGATTA GCATGACCAC GGACGCTGCC
TATCAAGCAA AAGAGGCCCC GAGTCTTGGT CAAGTCATTA TCAATATGAT GCCTTCAAAC
CCAGTCAGCG CGATGGCCGA AGGTAATATG CTACAAATCA TCGTGTTTTC GGTGTTATTC
GGCGTGGCTA TGTCGATGGC GGGTGAAGCA GGTAAACGTT TAACGTCTAT GTTTGAAGAT
CTTAGCGAAG TAGTGATGAA ACTGGTCACT ATATTAATGA ACCTAGCGCC ATATGGCGTA
TTTGTTTTAA TGGCCAAACT TTTCGCCACC ATCGGTTTTG ATACCATTGC CGGTTTGCTT
AAATACTTCT TGCTAGTGAT GTTCGTACTA ATGGTGCATG CGTTTGTGTC ATACCCCATT
ATTTTGAAGC TTTTAAGTGG ACTCAGTCCA ATCATCTTAC TGCGAAAGAT GCGTGACGCA
GCCATTTTCG CTTTTAGTAC CTCAAGCAGC GGCGCGACCT TACCGGTTAC GCTAGAAACG
GCAACCAACA AACTTGGCGT TAAGCCTTCT GTTGCATCTT TCACCATTCC TCTTGGCGCG
ACAATAAACA TGGATGGCAC CGCGATTATG CAAGGCGTGG CGACGGTGTT CATCGCACAG
GTTTATGGTA TCGATTTATC CCTAGGCGAT TACATGATGG TGATAGTGAC CGCAACACTA
GCATCCGTTG GTACAGCGGG TGTGCCTGGT GTTGGTTTGA TCATGCTGGC CATGGTGCTA
CAACAAGTCA ATTTGCCGGT TGAAGGCATT GCTTTAATTA TCGGCGTTGA TCGTCTACTC
GATATGACAC GCACCTCGGT TAACGTGACA GGTGACTGTA TGGTGGCCTG CATCGTCGCC
AAAAGTGAGG GAGAATTTGA TATTGACAGA TACAAGGATC CTGACGCAGG TAAAGAGGAA
GAAACATTGC ATTCGCCAAA AGCGAGTTAG
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| Protein sequence | MSQSLPSNPE KFSLTARIFF GMLAGIVIGG LLQQLFDDSG DFSFSVFGLE VSTYGLLVDG
IFNVVGQIFI ASLKMLVVPL VFVSLVCGTA SLSDPSKLGR LGGKSILLYI GTTAIAISLA
VGFALLVSPG ESISMTTDAA YQAKEAPSLG QVIINMMPSN PVSAMAEGNM LQIIVFSVLF
GVAMSMAGEA GKRLTSMFED LSEVVMKLVT ILMNLAPYGV FVLMAKLFAT IGFDTIAGLL
KYFLLVMFVL MVHAFVSYPI ILKLLSGLSP IILLRKMRDA AIFAFSTSSS GATLPVTLET
ATNKLGVKPS VASFTIPLGA TINMDGTAIM QGVATVFIAQ VYGIDLSLGD YMMVIVTATL
ASVGTAGVPG VGLIMLAMVL QQVNLPVEGI ALIIGVDRLL DMTRTSVNVT GDCMVACIVA
KSEGEFDIDR YKDPDAGKEE ETLHSPKAS
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