Gene Patl_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2309 
Symbol 
ID4172463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2809739 
End bp2810389 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID638055318 
Productsignal peptidase I 
Protein accessionYP_661880 
Protein GI109898625 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACAA AATTAACTAA ACTGTATAAA GACAACAGAG CGATGGTGTT GTTCATTGCT 
TTGATGTGCG TGTTTAGAAG TGCTGTGGCC GATTGGAACG AAGTGCCGAC AGGCTCTATG 
TTACCGACCA TAGTCGAGGG TGACCGGATC CTCGTGAATA AATTAGCCTA TGACGTGAGT 
ACCCCTTTCG TTCATCACTC TTTGTACAAG TTAGCTGATC CGATGCGCGG TGACATTATT 
GTATTCGACT CTGCAGTATC AGAAAAAAGA TTGGTCAAAC GTGTGGTAGG GGTGCCCGGG 
GATACCGTCG CATTAATGGA TAACGTGCTG TTTATTAACG GGCGACAAAT TGGTTATGCA 
GATTTAGCCA ACATAGATAA TTTCACTGAG GTCACGGAGG ATCTGCTGGG CATTCAACAC 
CGTATCCGCG TGGCAAATAA CGGCTCTGCG TTAGCAAACT TCCGCGCGGT AGACATTCCC 
TCAAATTACT ATTTGGCTAT GGGGGATAAC CGCGATAACA GTGCTGACTC CCGCGTGATA 
GGTTTAATAC CACGTGATGA AATTATCGGC AGGGCGAAAC AGGTGGTGAT GTCTTTGGAC 
TATGACAATT ACTACCTGCC AAGATCTGAC CGGTTTCTAC ATGATTTGTA G
 
Protein sequence
MMTKLTKLYK DNRAMVLFIA LMCVFRSAVA DWNEVPTGSM LPTIVEGDRI LVNKLAYDVS 
TPFVHHSLYK LADPMRGDII VFDSAVSEKR LVKRVVGVPG DTVALMDNVL FINGRQIGYA 
DLANIDNFTE VTEDLLGIQH RIRVANNGSA LANFRAVDIP SNYYLAMGDN RDNSADSRVI 
GLIPRDEIIG RAKQVVMSLD YDNYYLPRSD RFLHDL