| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2306 |
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| Symbol | |
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| ID | 4172460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2806652 |
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| End bp | 2807527 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638055315 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_661877 |
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| Protein GI | 109898622 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.80153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCAAC AAAATGTCTA TTGTGAGCCT TTGTGTATCG CCAAAGAATA TTTATTCGAT
ATACAAAAAG TAAGTTATCA AGAAGAAGAG CCGTATTCAT GTTTGATGCA CTTTCATGAA
GTACATGAAC TGATTATTTT TGAAGATATT CAGGGCAGCT ACTTTTCAAG CCAAGGAGAC
TCTACATTAC ACAATAGTGA CATAGTGCTA ACACCCGCGC TAGAAGTACA TAACTATGAA
ATAGGCCCTA AGGCTAAGTC TTGGTACCTG ATTCAGTTCT TACCTGAAGT GCTTGATTTG
CCGCAATTTC AATCTATCAA GCCAATGTTT AACCGCGGCA TGCACCTGAG AATGGACAGC
AAGAATACGT TGATCGTTCA GCAACAAACC AGGTGGCTGG TGGAGTGTTT CGAACAGCAA
CCTCGCAGTG AGAAGAGCCT TACGTTACTG TCGTTACTAC TTTTGTGGAT TGCGGATCAG
GCGCAAGCGG TGACGCAAAA TAGCGAGCAT ACCCTAAAAC AATCTCACGG ATTTTCGCGT
TTGCTGCCGG TGATTAATCT ATTTAAACAC GATAAGTATG TTAATTTGTC GGTGGGGGAG
GCTGCTGAAA AATGTCACTT ATCGACTTCT CATTTTTCTC GTTTATTCAA AAGTGTCTTT
CGTCACACTT ACGCCAATTA TATTTTGCAA CACAAGCTCT ATCATGGGGC TCGAATGCTC
AGTCAAAGCA AATACTCTGT CACTCAAATA AGTTACGAGA TGGAATTTTC CAGCCCATCC
CACTTCATTG CTCATTTTAA AAAGTATTAC GGCGTAACGC CTTATCAATA CCGAAGCGAT
ATAAATCGCA GAATGTTGAT CGCAGAAACA GCCTAA
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| Protein sequence | MKQQNVYCEP LCIAKEYLFD IQKVSYQEEE PYSCLMHFHE VHELIIFEDI QGSYFSSQGD
STLHNSDIVL TPALEVHNYE IGPKAKSWYL IQFLPEVLDL PQFQSIKPMF NRGMHLRMDS
KNTLIVQQQT RWLVECFEQQ PRSEKSLTLL SLLLLWIADQ AQAVTQNSEH TLKQSHGFSR
LLPVINLFKH DKYVNLSVGE AAEKCHLSTS HFSRLFKSVF RHTYANYILQ HKLYHGARML
SQSKYSVTQI SYEMEFSSPS HFIAHFKKYY GVTPYQYRSD INRRMLIAET A
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