| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2305 |
|---|
| Symbol | |
|---|
| ID | 4172459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 2805288 |
|---|
| End bp | 2806445 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638055314 |
|---|
| Product | cytochrome P450 |
|---|
| Protein accession | YP_661876 |
|---|
| Protein GI | 109898621 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2124] Cytochrome P450 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.378524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT ACCAATCTTC AGATCCGTTT AAAGAAGCTC GCGTGTCAAG TGGGTGTGCG
CATATGAACG ATCAAGATGA TCCTGTGACC ATGATTTTAC GTCTCAAAGA TGTGCGTAAG
ACAGCGCACA ATTGGAAGAC CTTTCAATCT GGTGCAGCCC CAGGGCGCAT CGTTATTCCC
TCTGAAGTGA ACATTCGTGA CACTCGGCAA ATACCTTTTG AAGTGGACCC GCCGTTACAC
GGCGCATTTC GCTCCTTGCT TGACCCTTGG TTTAAACGCC CCTTAAAGGC GCAGTACCAA
GAAACCTTGG CTCAGCAAGT TAATGCCTTG GTGGATGACG TATTAAAGGC CGATAGCATT
GACGTGGTAG AAGACTTTGC ACTATGCCTG CAATCGCGTG CGCTTACCTT ATTACTTAAT
ACCGACGCAG ATGAAGCAGA TACATGGATT GGCTGGGGTA CGCATGTGTT TCGCAGTGAA
GATGACCCCC TAGATGGCGA CAAAGCGGCC ATCCTATATG ATTACATTGA TGAAAAAATA
AAGGCCTCAT CCCCCAATCC AGAGGGCGAT TTGTACAGTG TATTGTTAGC GGCAGAGGTT
GAGGGCAAAA AGCTAACACA CGAAGAAATC AAAGGGATCA TGATACTCAC CTTTGCGGGC
GGGCGAGACA CTGTTATCAA CGCCGTGACA AATACGGTCA GCTACTTTGC GCAGCACCCT
GAATCATTGG CTAGATTACG TAATGAGCCC GAAATTATTG GCCGTGCGAT TGAAGAACTT
ATTCGTTATT TCACGCCGCT CACCCAGATG GGCCGCGTGG TCACGCAAGA CACTCAAGTA
TGTGAACATG CGATTAAAGC TGATTCTCGC GTGTCCCTTT GTTGGGCATC GGCCAATCGC
GACGAAAGTG TTTTCGAATC GCCAAATGAC GTCATCTTAG ATAGAAAGTT AAACCCGCAT
GTGAGTTTTG GTTTCAGTCA TCACAACTGT TTAGGGGCCA CACATGCTAG GCAAATTATG
CGGGTATTGA TTGAAACCTT GATGGCTAAA GTGGGCTCAA TCGACATTAT TGATTTCGAA
GAAAACATAG AATATTTGGG CGAATTCGAA CGTAAAGTGG GGTTTCATAA ACTGCACGTT
AATATTCATC CTCGATAA
|
|---|
| Protein sequence | MKNYQSSDPF KEARVSSGCA HMNDQDDPVT MILRLKDVRK TAHNWKTFQS GAAPGRIVIP
SEVNIRDTRQ IPFEVDPPLH GAFRSLLDPW FKRPLKAQYQ ETLAQQVNAL VDDVLKADSI
DVVEDFALCL QSRALTLLLN TDADEADTWI GWGTHVFRSE DDPLDGDKAA ILYDYIDEKI
KASSPNPEGD LYSVLLAAEV EGKKLTHEEI KGIMILTFAG GRDTVINAVT NTVSYFAQHP
ESLARLRNEP EIIGRAIEEL IRYFTPLTQM GRVVTQDTQV CEHAIKADSR VSLCWASANR
DESVFESPND VILDRKLNPH VSFGFSHHNC LGATHARQIM RVLIETLMAK VGSIDIIDFE
ENIEYLGEFE RKVGFHKLHV NIHPR
|
|---|
| |