| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2282 |
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| Symbol | |
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| ID | 4172436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2777770 |
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| End bp | 2779401 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055291 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | YP_661853 |
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| Protein GI | 109898598 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
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| TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAC ACAAATTGTC CGCAGAGTTA GCCAAGTTTG GCATTACCGA TGCCACTGAA
ATTCTACATA ACCCCTCTTA TGACGTATTG TTTGAGGAAA CGACACACCA TAGCCTTGAA
GGCTATGAAA AAGGTGTCGT GACCGAATTA GGTGCCGTCA ACGTGAACAC AGGCAAATTC
ACCGGCCGCT CCCCTAAAGA CAAATACATA GTGCGCGATG ATGTTACCAA GGACACCGTT
TGGTGGTCTG ATCAAGGTAA AAACGATAAT AAACCGATTT CTCCTGCCGT GTGGGACGAC
CTCAAAAGCA CAGTGACAAA ACAACTCAGC GGCAAACGCC TGTTTGTGGT TGATACTTAC
TGCGGCGCAA ATGAAGATAC CCGCTTAAAA GTACGCTTTA TTACAGAGGT CGCATGGCAA
GCTCACTTCG TCAAAAACAT GTTCATACGC CCAACAGATG AAGAACTGAT TAACTACGAT
CCAGATTTTG TGGTGATGAA TGGCGCGAAA ACCAATAACC CAAATTGGCA AGAGCACGGA
ATTAACTCTG AAAATTTCGT GGCATTTAAT CTAACCGAAA AAGTACAACT GATTGGTGGC
ACTTGGTATG GCGGTGAGAT GAAGAAAGGC ATGTTCTCAA TGATGAACTA CTTGCTCCCC
CTTAGAAACA TTGCCTCTAT GCATTGCAGT GCAAATGTAG GAAAAGACGG CGATGTTGCA
ATCTTCTTCG GTCTGTCCGG TACCGGAAAG ACCACTTTAT CGACAGATCC AAATCGCGAA
TTAATCGGCG ATGATGAGCA CGGTTGGGAT GACAATGGCG TGTTTAATTT TGAAGGCGGC
TGCTACGCCA AAACCATCAA TTTAAGTAAA GAAAACGAAC CTGATATCTA TAATGCGATT
CGCCGAGATG CTTTGCTTGA AAACGTGACG GTTGATGCCG ATGGTAAAAT CGACTTTGAC
GACAACAGCA AGACTGAAAA TACCCGAGTA TCTTATCCTA TTCACCATAT CGACAATATT
GTGAAGCCCG TCTCGCGCGC AGGCCACGCA AACAAGGTCA TTTTCTTAAC GGCCGATGCA
TTTGGTGTGC TTCCTGCGGT ATCAAAATTG ACGCCTGAAC AAGCCCAGTA CTATTTCTTA
TCTGGCTTCA CCGCTAAATT GGCGGGCACT GAGCGTGGTA TCACTGAGCC TACACCGACG
TTTTCTAGTT GCTTCGGCGC AGCGTTTTTA AGCCTTCATC CTACGCAATA TGCTAATGTG
CTTAAAAATC GTATGCAGGC TGCTGATGCG CAGGCTTACT TAGTCAATAC AGGTTGGAAT
GGCACCGGCA AGCGCATTTC GATTAAAGCA ACTCGAGCCA TTATCGACGC AATTTTAGAC
GGCTCTTTAG ATGATGCTGC CACGACCACC CTACCTATTT TTAATCTACA GATCCCGCAA
AAATTAGGTG AGCTAGACAC AGACATTCTT GACCCGCGTA AAACCTATGA TAATGAGAGC
CAATGGACCG ATAAGGCAAC AAGCTTAGCG GGACTGTTTA TTGATAATTT TGATAAATTT
ACGGATACCG ATAATGGTAG AGTATTAGTT GCAGCCGGGC CCAGCCTGTT TAGCCATGCT
AAAAGCGCGT AG
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| Protein sequence | MNIHKLSAEL AKFGITDATE ILHNPSYDVL FEETTHHSLE GYEKGVVTEL GAVNVNTGKF
TGRSPKDKYI VRDDVTKDTV WWSDQGKNDN KPISPAVWDD LKSTVTKQLS GKRLFVVDTY
CGANEDTRLK VRFITEVAWQ AHFVKNMFIR PTDEELINYD PDFVVMNGAK TNNPNWQEHG
INSENFVAFN LTEKVQLIGG TWYGGEMKKG MFSMMNYLLP LRNIASMHCS ANVGKDGDVA
IFFGLSGTGK TTLSTDPNRE LIGDDEHGWD DNGVFNFEGG CYAKTINLSK ENEPDIYNAI
RRDALLENVT VDADGKIDFD DNSKTENTRV SYPIHHIDNI VKPVSRAGHA NKVIFLTADA
FGVLPAVSKL TPEQAQYYFL SGFTAKLAGT ERGITEPTPT FSSCFGAAFL SLHPTQYANV
LKNRMQAADA QAYLVNTGWN GTGKRISIKA TRAIIDAILD GSLDDAATTT LPIFNLQIPQ
KLGELDTDIL DPRKTYDNES QWTDKATSLA GLFIDNFDKF TDTDNGRVLV AAGPSLFSHA
KSA
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