Gene Patl_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2272 
Symbol 
ID4172426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2764799 
End bp2765425 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content48% 
IMG OID638055281 
Producthypothetical protein 
Protein accessionYP_661843 
Protein GI109898588 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATG ACTACTTTCA TGTCCTCAAC CTAATTGGTG TCGCTTTTTT TGCTGTATCA 
GGCACGCTGC TCGGCTACGA AAAAAAAGTG GGTGGCTTTG GCGTGGTCGT GGTGGCCAGT 
GTGACCGCAT TAGGTGGTGG CTCTCTTCGC GACTTATTGC TGAATGAGCC GGTATTTTGG 
GTCGCCGATC CAGACTATTT GTACTCAACC TATGCTGCAA TCTTCATATC AGTCGCATTT 
ATTCGCTACC TGCCCCATGT TTCGAACTAT TACTTCTTGC TGCTCGATGC CGTGGGCATG 
GCCATTTTTA ATATTGTCGG TATTGAGAAA TCTTTAATTG GCGGAACGGG TATGCTCATC 
GCCATAACCA TGGGCACCAC TACAGGTATT TTTGGTGGGC TGATCCGTGA TGTAATTTGC 
AGGGAGGTCC CGTCAGTTAT GCGGGGGGAA CTGTACGCCT CTGCATGTGT ATCGGGCGGT 
TTAGTCTATG CTGTGCTTTT CTCTTTTGGC GCGCCGTACA TATGGTGTAT TTTGGGCTCG 
TTATTTGCCA CTGTCTTCTT GCGAATGGGG GCACTTCACT GGAATTGGCG GCCAAAAATA 
TTCAAGAAAC GCCATTATAA AGACTAA
 
Protein sequence
MTDDYFHVLN LIGVAFFAVS GTLLGYEKKV GGFGVVVVAS VTALGGGSLR DLLLNEPVFW 
VADPDYLYST YAAIFISVAF IRYLPHVSNY YFLLLDAVGM AIFNIVGIEK SLIGGTGMLI 
AITMGTTTGI FGGLIRDVIC REVPSVMRGE LYASACVSGG LVYAVLFSFG APYIWCILGS 
LFATVFLRMG ALHWNWRPKI FKKRHYKD