| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2256 |
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| Symbol | |
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| ID | 4172410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2742736 |
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| End bp | 2743641 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055266 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_661828 |
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| Protein GI | 109898573 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAGT TAATTAAAAA AGTATTTGAA CTGGCGCCAC ATGAGGGAGA CTTTAATACT
AGCGTTCCAC ATTTAAGCCT ATTTCGTAGA GACACGCCAA CGACGAGCCC TATGCCTGTC
ATATACCAAC CTAGTATATA CATGGTGTTA CTTGGCTCTA AAGCGGCCTA CCTCGGTAAA
GAACGTTATC AATACGATCC CATGCATTAC TTAGTTAGTT GCGTGCCTTT GCCATTGGAG
GGGCAAATAT TACAAGCCAG CGAGCAACGT CCCTATCTCG CCGCACGCAT TAGCCTTGAA
ACCCACATGA TCAATGAGTT ATTGATGCAG ATGCCAGATG AACCAGAAGC CCCCGTCACA
GCAATTGATA TACAGAGTAA CGACGGTACG TCATCTAGGG GAATTTATGT CAGTAAAATG
AACACTGACA TTCAACACAC CTTATCTAGG TTACTAGATT GTGCTCACTC AACGACAAAA
GCGCATGTAC TAGGTCAACT CGCACTTAAA GAGTTAATTT ACCACATACT GAACGCAGAA
CACGGCTCAT TGCTGAGGGC ATTTGCATGC CAAGACAGAC AGCAATATCA CATAGCAAAT
GTACTTCAAT TTATTAATCG TCACTATGCC TCGAGCATGG ATATTGCAAC ACTGGCCAGT
AAAGCCAATA TGAGTGAATC GTCGTTTTAT CATCACTTCA AAGCAGCGAC AAACACTTCA
CCCATTCAAT ACATCAAAAT GGTGCGCTTA CATGCTGCTA AACGCAAAAT GATGTTTGAA
CAGCACAATG CCACCTCCGC TGCCTTTGAA GTTGGCTATA CCAGCGCGTC TCAATTTAGT
CGTGAATACC GTCGGCTTTT TTCAGTTCCT CCAGCACAAG ACGCACGCAC TGCTTCTAAG
GTATGA
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| Protein sequence | MTELIKKVFE LAPHEGDFNT SVPHLSLFRR DTPTTSPMPV IYQPSIYMVL LGSKAAYLGK
ERYQYDPMHY LVSCVPLPLE GQILQASEQR PYLAARISLE THMINELLMQ MPDEPEAPVT
AIDIQSNDGT SSRGIYVSKM NTDIQHTLSR LLDCAHSTTK AHVLGQLALK ELIYHILNAE
HGSLLRAFAC QDRQQYHIAN VLQFINRHYA SSMDIATLAS KANMSESSFY HHFKAATNTS
PIQYIKMVRL HAAKRKMMFE QHNATSAAFE VGYTSASQFS REYRRLFSVP PAQDARTASK
V
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