| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2185 |
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| Symbol | |
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| ID | 4172337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2640933 |
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| End bp | 2641952 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055193 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_661757 |
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| Protein GI | 109898502 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAA AAGCAACATC GTTTGATATC GCTCATCAAG CTGGTGTATC GCAGTCGACC
GTTTCCCGTG CTCTTCGTGA TAGTCCATTG GTCAATAAAG AAACCCGTGA AAAAGTGCAA
GCTATAGCCC TAGAGCTTAA TTATAAAGTC GATAAAAATG CCAGTAACTT GAGGCGCCAA
CACAGCAAAA CCCTAGCGCT GTTATTGTTT GAAGACCCAA CCTCTGATAA CTCGCTAATA
AACCCATTTT TTTTATCTAT GCTTGGCAGC ATCACACGCG CATCGGCAAA AGCTGGTTAT
GATTTACTTA TTTCATTTCA AAATCTTAGT GATGATTGGC ATGCGGAATA TGAAGATTCT
AATAAAGCTG ATGGCATCAT CTTACTAGGC TACGGTGACT ACACCGAATA CCGCACGAAG
CTGAGCCAAC TAGAGGCACA AAACACACAC TTTGTACGCT GGGGAGCATT AGACGATGAA
CACCCCGGTG TGTCCATTGG TTGTGATAAT TTTCAAGGTG GCTTTGATGT GACTCAACAT
TTGCTCGGCT TGGGTCGTCA TCAATTCGCG TTTATCGGCG GAGCAGACAC CCGCGCCCCT
GAATTTTTTG CGCGCTACCA AGGTTATCAC AAGGCGCTGA CACTGGCAGA CGTCGCTCAA
AGCGCAGTGC AACAAGACGC TATTTCGACT GAAGATTCCG GGTACAGTGC GACACTTGCA
CTGCTTAAAC GGTATCCTGA TATCGATGCG ATTGTATGTG CTAGCGATCT TATTGCGATC
GGGGTGTTAA GAGCATTAAG AGATAGCAAT ATACCTATCC CTCACCAAAT CGCCGTCGTA
GGTTTTGACA ATGTCCCTGT GGCCGGTTTT GCGACACCTG CCTTGACTAC CGTCAAGCAG
GACACCATTT TAGCGGGCGA GATATTAGTC GACAGCTTAC TTAAATTAAT TGAAGGTGAA
AAAGTTGAGC ATTACTTAAT GCCCGTTGAC TTAGTTATTC GCCAGTCAAG CGGCGCCTAG
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| Protein sequence | MKAKATSFDI AHQAGVSQST VSRALRDSPL VNKETREKVQ AIALELNYKV DKNASNLRRQ
HSKTLALLLF EDPTSDNSLI NPFFLSMLGS ITRASAKAGY DLLISFQNLS DDWHAEYEDS
NKADGIILLG YGDYTEYRTK LSQLEAQNTH FVRWGALDDE HPGVSIGCDN FQGGFDVTQH
LLGLGRHQFA FIGGADTRAP EFFARYQGYH KALTLADVAQ SAVQQDAIST EDSGYSATLA
LLKRYPDIDA IVCASDLIAI GVLRALRDSN IPIPHQIAVV GFDNVPVAGF ATPALTTVKQ
DTILAGEILV DSLLKLIEGE KVEHYLMPVD LVIRQSSGA
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