| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2184 |
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| Symbol | |
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| ID | 4172336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2638971 |
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| End bp | 2640647 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055192 |
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| Product | glutaminyl-tRNA synthetase |
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| Protein accession | YP_661756 |
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| Protein GI | 109898501 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.213652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGA CCGAGAGTCG TCCGACCAAT TTCATTCGTC AAATCATCGA TAAAGATCTG
CAATCAGGTT TGCATAAGCA GATTCATACG CGTTTTCCAC CTGAGCCAAA TGGTTATTTG
CATATAGGTC ATGCTAAGTC TATCTGCTTA AACTTTGGCA TTGCGCAGGA TTACCAAGGT
CAGTGCAACT TACGGTTTGA TGACACCAAC CCTGATAAAG AAGACATTGA TTACGTTAAT
GCGATTAAAA ATGACGTAAT CTGGCTAGGT TTTGAATGGC ATGGCGAAGC ACGATACTCG
TCTAACTATT TTGATCAACT GCACGCCTAT GCCGTTGAGC TAATAGAGAA AGGCTTAGCC
TATGTGGACT TTTCGAACCA AGAACAAGTA CGAGAAATGC GTGGTACTTT GACAACTCCA
GGTACCAATA GCCCTTATCG TGATACGTCA ATCGAGGAAA ATATTGCTCA GTTTGCGAAA
ATGCGCAACG GAGAATATAA AGAAGGCGAG TGTTTGCTGC GGGCTAAAAT CGATATGTCA
TCGCCGTTCA TGTGTATGCG CGACCCAGCG TTGTATCGCG TTAAGTTTGC GCATCACCAT
CAGACTGGCG ATAAGTGGTG CATATATCCT ATGTACGATT TTACCCATTG TATTTCTGAT
GCGATTGAAG GCATAACCCA TTCATTGTGC ACGTTGGAAT TTCAAGACAA CCGACGATTG
TATGACTGGG TGTTAGAAAA CGTCACTATT GATGTGGTAC CGCGCCAATA TGAATTTTCT
CGGCTCAACC TTGAATACAC AGTGCTTAGT AAGCGCAAGC TCATCCAATT AGTGGATGAA
GAATTTGTGA GTGGTTGGGA TGACCCGCGT ATGCCTACCA TTGCGGGTCT TCGTCGCCGA
GGCTTTACTG CTGCTTCGAT TCGTGAATTT TGTAAACGTA TTGGCGTGAC CAAAATGGAT
AACATGGTTG AAATGAGCAT GTTAGAGGCG CCTCTGCGGG ACGAACTGAA TGAAAATGCT
CCGCGCGCTA TGGCCGTGCT CGAGCCAGTT AAAATAGTGA TAGAAAACTA TCCACAGGAT
GGTGTTGAAT TACTTGCGGC GCCTAATCAT CCCAACCGCC CCGAATTGGG CAGCCGCGAA
GTGCCCTTCG CACGGGAAAT TTATATTGAA GCTGAAGACT TCAGAGAAGA AGCCAATAAG
AAATTTAAAC GCTTGGTACT AGGTAAAGAA GTGCGTTTAC GTAATGCCTA TGTCATCAAA
GCGCAGCGTG TTGAAAAAGA CGAGCAGGGG AACGTGACCA CCATATTTTG TGAATACGAT
GGCGACACGT TAGGAAAAGA TCCTGCAGAT GGCCGCAAAG TAAAAGGGGT TATCCACTGG
GTGTCAGCTG CTCATGCGGT TGCCGCTGAA ATTCGCTTGT ATGACAGTCT TTTTACTGTG
CCTAACCCAG CAGCCGAAGA CGATTTTGTG GCGTGTATTA ATCCTGAATC ATTAACAGTC
AAACAAGGTT GGGTTGAACC CAGTCTGGCC AAAGTTGATA TTGATGAAGC AAATATTCAA
GCATTTCAGT TTGAGCGTAC TGGGTATTTT TGTTTCGATA AAGACAGTAC AACAAGTAAG
TTGGTCTTCA ATCGCACCGT CGGTTTGCGA GACACATGGG CTAAAATAGG GGACTAA
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| Protein sequence | MAETESRPTN FIRQIIDKDL QSGLHKQIHT RFPPEPNGYL HIGHAKSICL NFGIAQDYQG
QCNLRFDDTN PDKEDIDYVN AIKNDVIWLG FEWHGEARYS SNYFDQLHAY AVELIEKGLA
YVDFSNQEQV REMRGTLTTP GTNSPYRDTS IEENIAQFAK MRNGEYKEGE CLLRAKIDMS
SPFMCMRDPA LYRVKFAHHH QTGDKWCIYP MYDFTHCISD AIEGITHSLC TLEFQDNRRL
YDWVLENVTI DVVPRQYEFS RLNLEYTVLS KRKLIQLVDE EFVSGWDDPR MPTIAGLRRR
GFTAASIREF CKRIGVTKMD NMVEMSMLEA PLRDELNENA PRAMAVLEPV KIVIENYPQD
GVELLAAPNH PNRPELGSRE VPFAREIYIE AEDFREEANK KFKRLVLGKE VRLRNAYVIK
AQRVEKDEQG NVTTIFCEYD GDTLGKDPAD GRKVKGVIHW VSAAHAVAAE IRLYDSLFTV
PNPAAEDDFV ACINPESLTV KQGWVEPSLA KVDIDEANIQ AFQFERTGYF CFDKDSTTSK
LVFNRTVGLR DTWAKIGD
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