| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2111 |
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| Symbol | |
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| ID | 4173790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2557218 |
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| End bp | 2558453 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055119 |
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| Product | phage integrase |
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| Protein accession | YP_661683 |
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| Protein GI | 109898428 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATTA TATTTATGCC GCTATTTCCT CATGCTGAAC AACTGGACGT GGGGGTTGCT
TATATTAATC AACAAGTGAT GGACTTTGAC CTATCAATAA AGGACGCCGC CTACAGTTAC
GAGTTAGCCA TTGAGTATTT GAGTGAGAAC CGTTTTAACG CTAATAACTT TAAGTCGATC
CGTAGTGAAC TAAATCTTTT ATTTAACTGG GCTTGGCGGG TGAAAGAGCT CTCCATTGCT
GAAATAGACA GAGTGCAATT ACGTAAGTTT GTGGATTTTT GCAATGAGCC GCCATCAGAA
CTTATCACAC ATGCGTCATA CCCGTTCTTT GTCGCGCACA AGCAAGACGG CACAATTGAG
CCTAATCCCA AATGGCGGCC GTTCGTATTA AGAGACGCAG CATGCTATGT GCGAAAAACA
TCCACCTTAA AAGCACAGCT GTCTCTATTA AGCGGGTTCT TTTTATTTTT AAGTGACATG
GAATACTGTG ATAAGAATCC TGCGGCTGTG TTGTTGCGCA GGCTGAACGT AAATAATACG
CACGTTATCG AGTCTTCTGA TGATGAAAAA GCGTTGAGTG AATTACAATG GCAGAGTGTC
TGGCAGCAGG TTAATCATCT TGCGGATACT CAACCAGAAA AACACCAACG CACCCGCCTA
CTTTTCGCCA TGTTGTACTT GCTCTATCCA AGGGTCTCTG AAATAGCCGC TAGGCCAGGC
TATACGCCTA TGATGAGCAG CTTTATACGC CACAGAAGCG GGCATTGGGT GTTTAAAATT
CCACGCAGTA AAGGTGGCAA AAGCCGTATG ATCCCCTGCC CTGATGAGTT AATTCAATGC
TTGAGTCACT ATCGACGTTA TATAGGACTC AGTGATTTGC CTTTACCTAA TGAACAAGTT
CCCTTGTTTG TGCGTCACAA AGCCGGGACT CACGGGCGCG AAACAGGCAT TTTAACCGCA
CAGCTAGGTA TCGAATCTAT ACGTAGTATT GTGCGCTTCG TGTTTGATAC TACTGCAGAT
AACTTAGAGG AAACAGCACC TCAAGAAGCT CACGAGCTTC GACAATTTAG CGTTCATTCG
TTACGCCATA CAGGAATTAC CACCTCCATT ACTGCGGGGA CGCCGCTACA AGTGGTGATG
AAAAACGCGG GGCATGCTGA CTTATCCACG CTTTCAATTT ACATCTCTAC GGATATTCAA
CAACAAGCTG AGGCAACAGT GCCGCGTAAA TTATAA
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| Protein sequence | MSIIFMPLFP HAEQLDVGVA YINQQVMDFD LSIKDAAYSY ELAIEYLSEN RFNANNFKSI
RSELNLLFNW AWRVKELSIA EIDRVQLRKF VDFCNEPPSE LITHASYPFF VAHKQDGTIE
PNPKWRPFVL RDAACYVRKT STLKAQLSLL SGFFLFLSDM EYCDKNPAAV LLRRLNVNNT
HVIESSDDEK ALSELQWQSV WQQVNHLADT QPEKHQRTRL LFAMLYLLYP RVSEIAARPG
YTPMMSSFIR HRSGHWVFKI PRSKGGKSRM IPCPDELIQC LSHYRRYIGL SDLPLPNEQV
PLFVRHKAGT HGRETGILTA QLGIESIRSI VRFVFDTTAD NLEETAPQEA HELRQFSVHS
LRHTGITTSI TAGTPLQVVM KNAGHADLST LSIYISTDIQ QQAEATVPRK L
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