| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2055 |
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| Symbol | |
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| ID | 4173929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2500678 |
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| End bp | 2501895 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055063 |
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| Product | amidase |
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| Protein accession | YP_661627 |
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| Protein GI | 109898372 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.478498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACG CTGCATCGCA TTTTATCAGT CAGACACCAT ACGTATTACA ACTAAACCAA
GAACCAGGCC AAGAATCAGA CCAAGACAAG CAAAGCAGCG ATGCATCCCT CAACGGTGTG
TCGTTAGCGG TTAAAGACTT ATTTCATATA AAGGGATTAC CCACCACCGC TGGGAATCCT
GATTGGTTAG CGAGCCACCC TGCACCGCAG CAAACGTCAC CTGCAGTTAA CGCTCTTTTA
CATGCCGGTG CATCTTTAGT CGGTAAAACC ATCACCGACG AATTGGCGTA TAGCTTAAAT
GGCCAGAATA TTCATTACGG AACGCCATTT AATATATCCG CACCAGATAG ACTGCCCGGA
GGCTCATCAA GTGGATCGGC AGTGGCTGTG CGCGAAGGCA GCGCACAAGT AGGTTTGGGC
ACTGATACCG GTGGCTCAAT ACGTGTACCG GCTAGCTATA ACGGCTTGTT TGGTTTGCGC
CCCACGCATG GGCGTGTTAG CTGTGAGCAT ATGGTCAGCC TTGCACCGAG TTTTGATACT
GTGGGTTGGA TAACCCGGGA TTTATCGACC TTAGATAAGG TCGCGCAGGT ATTGCTTAAC
AAGGACGACG ACCAAACACC TTGCCCAGTG AAAGACGCTA AAATCGGCTT CGCTGAAGAG
TTAGCCGCCC AATGTGAATA CTCTGACACA CTGGGTACTG CGTACAATAG AATGGTTAAG
CGCCAGTGCA CTTTATCCTC CGGTTTATCT TCGGATTTAT TAACTCAGGC CAGCGGAACC
TTTCGTATCT TGCAAGGCTA TGAAATCTGG CAAACCCATG GGCAGTGGAT AACAGAGCTA
AAACCTACCT TTGCTCCTGA TATACAAGAG CGATTCGAAT GGTGTGCCAC TATCACTGAA
GATCAGCAGC AAAATGCAAA GAAAAAACAA AAAGAATTTA TTTCTCACAT CCAGCATCTA
TTTAGTCAAT GCGATGTGAT ATTTTTACCA ACAACGCCCG GCGCCGCGCC ACTGATAAAT
ACGCCGAGTG AACAATTAGC CACCTATCGG AATACCCTGA TGAACCTTAC CTGTATTGCA
GGTCTATGTG GTCTACCTCA GTTACATATT CCGCTAGCCA TTAACCCGCA GGCGCCTATT
GGATTTTCAT TAATTGGCCA AAAAAATCAT GACAAACAGT TAATCGAAAT CGCACGCATG
CTTTTAGAGA ATGAATAA
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| Protein sequence | MSNAASHFIS QTPYVLQLNQ EPGQESDQDK QSSDASLNGV SLAVKDLFHI KGLPTTAGNP
DWLASHPAPQ QTSPAVNALL HAGASLVGKT ITDELAYSLN GQNIHYGTPF NISAPDRLPG
GSSSGSAVAV REGSAQVGLG TDTGGSIRVP ASYNGLFGLR PTHGRVSCEH MVSLAPSFDT
VGWITRDLST LDKVAQVLLN KDDDQTPCPV KDAKIGFAEE LAAQCEYSDT LGTAYNRMVK
RQCTLSSGLS SDLLTQASGT FRILQGYEIW QTHGQWITEL KPTFAPDIQE RFEWCATITE
DQQQNAKKKQ KEFISHIQHL FSQCDVIFLP TTPGAAPLIN TPSEQLATYR NTLMNLTCIA
GLCGLPQLHI PLAINPQAPI GFSLIGQKNH DKQLIEIARM LLENE
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