| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2054 |
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| Symbol | |
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| ID | 4173928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2499089 |
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| End bp | 2500675 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055062 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_661626 |
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| Protein GI | 109898371 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.700984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACA CATCAAAACC TGTCGCATTT ACAGCGCCAC ATTACGCAGC GAGTCAAGTT
GGACAAAACG TCTTGCAACA TGGTGGTACC GCCATAGAAG CCATGGTGGC TGCTGCTGCG
TCTATTTCAG TGGTCTACCC ACACATGAAC AGCATGGGCG GTGACGGCTT TTGGTTAATC
AGTGAGCCCG GAAAAGCCCC CATAGCGATT GATGCCAGCG GTACGGCGTG TAAAAACGCT
ACTCTTAGTT ATTACGCTGG GCAATCTGCT ATTCCTTCAA GAGGTTCTAA AGCCGCGTTG
ACCATGGCAG GCGCTGTCGC AGGTTGGCAT AAAGCATTGG AGATCAGTAA AACATGGCAA
ACACCTCTGC CGCTGAGTGA ACTACTCGCC CCAGCGATAG GCCAAGCTGA ATGGGGTATT
GAAGTCACAC AAAGTTTGCA AGACGCCAGT GAAAAAACAT TCGAGGACTT ATCAACCATC
CCTCACTTTG AACAATTCTT GATCAAAGGT AAGAGTTTGA AAAAAGGGAA GATCCTAAAA
CTGCCAACCA TCGCAAAAAC CTTGAACAAA TTAGCAGAAA ATGGATTGCA GGATTTTTAC
CAAGGCGAAA TAGCCCAGGC GTTAGCAGAA GATTTGCACG CAGCGGGCTC CCCTATCACC
CTTGAAGATA TTAACGCTTA CGAAGCTAAA ATTGTTGAGC CGCTCTCGGT AACCACATCC
GTAGGTACCT TATACAACTT ACCGGCCCCT ACTCAAGGCG TTGCTTCGTT ATTAATACTG
GCCTTATTCG ATAAAGTACA ACACTTGGCC ACAACAGAAG CCGAGTTTGT GCATTTGTTA
GTGGAGTGCA CAAAGCAAGC CTTTATCAAG CGCAATCAAT TTGTCGGTGA TGCCAGTCGC
TTGAACGTCG ATTTGCAAAG CCTGCTATCG GCAGAATCAC TAGATAGTAT GCTAGCTGAC
ATCACCCTTG AACACGCGTT ACCTTGGCCA CATCAAGCGA AACCCGGAGA CACAATATGG
ATGGGAGCAT GTGATGGTGA AGGCCGAATG GTTAGTTACA TCCAAAGTAT TTACTGGGAA
TTTGGTAGTG GTGTTGTCTC GCCACAAACG GGGATTGTGT GGAATAACCG TGGCACATCA
TTCTCGTTAA CCCCTGATAG CTTACAAGAA CTGGCCCCAG GCATGAAACC ATTTCATACC
TTAAACCCTG CCTTTGCTGA GCTGAAAGAC GGTCGGCGTT TAAGCTATGG CACCATGGGC
GGCGAAGGCC AACCTCAAAC ACAAGCCGCC TTGTTCGCGC GCTATATTTA TCAGCAAAAG
TCGTTGCCTG AATCTATTCG CTTAGGTCGC TGGTTACTTG GCAGAACTTG GGGGGATGAG
AGTCACAATT TGAAAATTGA GCAAGACTTA GCAGAGACTA TTCAAAACGA ACTCATAGCT
AAAGGTCATG ATATTGCGCT GGTTGATTCA TGTAATGAGT TAATGGGTCA CGCTGGCGCG
GTTGTTAAAC GACCTGATAA TACGGTAACA GCTGCCACCG ACCCTCGCAG TGACGGAAAC
GCATTTGCAG CACACACTTT AGACTAA
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| Protein sequence | MSNTSKPVAF TAPHYAASQV GQNVLQHGGT AIEAMVAAAA SISVVYPHMN SMGGDGFWLI
SEPGKAPIAI DASGTACKNA TLSYYAGQSA IPSRGSKAAL TMAGAVAGWH KALEISKTWQ
TPLPLSELLA PAIGQAEWGI EVTQSLQDAS EKTFEDLSTI PHFEQFLIKG KSLKKGKILK
LPTIAKTLNK LAENGLQDFY QGEIAQALAE DLHAAGSPIT LEDINAYEAK IVEPLSVTTS
VGTLYNLPAP TQGVASLLIL ALFDKVQHLA TTEAEFVHLL VECTKQAFIK RNQFVGDASR
LNVDLQSLLS AESLDSMLAD ITLEHALPWP HQAKPGDTIW MGACDGEGRM VSYIQSIYWE
FGSGVVSPQT GIVWNNRGTS FSLTPDSLQE LAPGMKPFHT LNPAFAELKD GRRLSYGTMG
GEGQPQTQAA LFARYIYQQK SLPESIRLGR WLLGRTWGDE SHNLKIEQDL AETIQNELIA
KGHDIALVDS CNELMGHAGA VVKRPDNTVT AATDPRSDGN AFAAHTLD
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