| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2053 |
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| Symbol | |
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| ID | 4173927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2498206 |
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| End bp | 2499030 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055061 |
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| Product | hypothetical protein |
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| Protein accession | YP_661625 |
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| Protein GI | 109898370 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAT TAGTGTTAAA CAACCTGCCA ACAATCGCCG CATTGATCGG CACAGGCATT
TTCGCGGGTT TACTGGCAGG ATTGCTTGGT GTGGGCGGCG GAATAGTGAT CGTACCCGTG
TTGTTTTTCT TGTTTCAGTC CTTCGGTGTC AGCCCAGAAA GTGCCATGTA TATTGCAACA
GGCACCTCTT TAGCAACCAT TATTCCGACC TCGATCAGCT CGATTCGCTC ACACCGCAAA
AAAGGCAATG TTGATGCAGA CTTACTCAAG CAATGGGGGT TATTGATTTT AATTGGCGTA
CTGATTGGCA GTTGGCTTGT GACCAAGGTA GATGGCCGAT ACCTAACAAC CTTATTTGGG
ATCGTAGCGA CGCTATCTGC CCTTAACATG TTGTTTAGAA CAGGGAAATC AGCGCTAGCC
AATAGCTTAC CTGGCCGTAT AGGTCAATCT ATTATTGCAG GTTGTATCGG TTTTTTCAGT
TCAATGGTGG GCATCGGTGG CGGTACGTTA TCCGTGCCGA TTTTAACCGC TTTTAATTAT
CCTGCCCACA AGGCCGTGGG CACGGCCGCT GCGATTGGCC TGATCATCTC GTTTCCTGCT
GCACTTTACT TACTGATTTT CGGCCAAACA CCGCAAGATG CACCACTTGG CACTTTCGGT
TACATCAATC TTGTAGGCTT CGCTTGCATT GTGCCGTTAA CCGTTATTTG CGCGCCTATC
GGTGCAGGTA TCGCCTCTAA ACTTGATGCC AATATGTTGA AAAAAATCTT CGCCGTGGTG
TTACTCATCA CCGGCACACG CATGCTTGCA CAGTTATTTA TATAA
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| Protein sequence | MMELVLNNLP TIAALIGTGI FAGLLAGLLG VGGGIVIVPV LFFLFQSFGV SPESAMYIAT
GTSLATIIPT SISSIRSHRK KGNVDADLLK QWGLLILIGV LIGSWLVTKV DGRYLTTLFG
IVATLSALNM LFRTGKSALA NSLPGRIGQS IIAGCIGFFS SMVGIGGGTL SVPILTAFNY
PAHKAVGTAA AIGLIISFPA ALYLLIFGQT PQDAPLGTFG YINLVGFACI VPLTVICAPI
GAGIASKLDA NMLKKIFAVV LLITGTRMLA QLFI
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